| Entry |
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| Symbol |
smurf1
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| Name |
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
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| KO |
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| Organism |
cgar Clarias gariepinus (North African catfish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cgar00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128518892 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128518892 (smurf1)
04350 TGF-beta signaling pathway
128518892 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128518892 (smurf1)
04137 Mitophagy - animal
128518892 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
128518892 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:cgar04131]
128518892 (smurf1)
04121 Ubiquitin system [BR:cgar04121]
128518892 (smurf1)
03029 Mitochondrial biogenesis [BR:cgar03029]
128518892 (smurf1)
Enzymes [BR:cgar01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128518892 (smurf1)
Membrane trafficking [BR:cgar04131]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128518892 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
128518892 (smurf1)
Ubiquitin system [BR:cgar04121]
Ubiquitin ligases (E3)
HECT type E3
128518892 (smurf1)
Mitochondrial biogenesis [BR:cgar03029]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128518892 (smurf1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:20350323..20398917
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| AA seq |
731 aa
MSNPGNRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNASDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENEGPVFEDSGPGRPLSCFMEEPL
PYSDPTGAAGGGNCRALESPNQDQRLQTQRIRNQEPRSHAHTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEELGPLPPGWEIRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMSQQSQVKESSQALPVQMDVPVEEGEGELPARYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTLPFYKQLLGKPIQLSDLETVDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGRNIPVTEENKREYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDHK
ELELIIGGLGKIDLSDWKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE |
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| NT seq |
2196 nt +upstreamnt +downstreamnt
atgtcgaatcccgggaatcggaggaacggctcgagcatcaaaatcagactgacagtatta
tgtgccaagaatctcgccaagaaagacttcttccggttgcccgacccttttgccaaagtc
gtggtcgatggctcgggtcagtgtcactccacagacacggttaagagcacactcgaccca
aagtggaaccagcactatgatttatatatcgggaaaacggactcgatcaccatcagcgtc
tggaaccataagaagatccacaagaagcagggtgccgggttcctggggtgtgtgaggctc
ctgtccaatgccatcagccgactcaaagatacaggctaccagcgtttggatttatgcaaa
ctgaacgcctcggacagtgacgccgtccggggtcaaatagtcgtgagcctccagacgcgt
gacaggattggcagcggcggcccggtggtagactgtcgagggctgttagagaatgaaggg
ccggtgtttgaggactccggaccaggacggccgctcagctgtttcatggaggagcctctg
ccgtactccgaccctacaggagccgctggtgggggaaactgtcgcgccctggagtcacct
aatcaagaccagagacttcaaacgcagagaatccgaaaccaggagcccaggagtcacgca
cacaccccacagaaccggccacacgggcaccagtcgccagaccttccagaaggctacgag
cagaggacgacggtgcagggacaggtctattttctacacacacagaccggagtgagcact
tggcacgatcccagaataccacgggatctgaacagcgtgagttgtgaagagctcggtccg
ctgccgcccggctgggagatccggagcacggtgtcgggaaggatttatttcgtcgaccac
aataacagaaccacgcaattcacagacccgagattacaccacatcatgagccaacagtct
caagtgaaggagtcgagccaagctctgccagtgcagatggacgttcctgtagaggagggt
gaaggagaacttcctgcgcgttatgagagagatctcgtccagaagctgaaggtcctgcgg
cacgagctctcgctgcagcagcctcaggccggacactgccgcatagaggtgtcacgagaa
gagatctttgaggagtcgtacaggcagatcatgaagatgaggccgaaggacttgaagaag
aggctgatggttaaattccgtggagaagaaggcttggattacggcggcgtggcaagggag
tggttgtaccttctgtgccatgagatgctcaatccgtactacggcctgttccagtactcc
acagataacatctacacgctgcagatcaaccccgactcgtccatcaaccctgaccactta
tcatacttccactttgtggggaggatcatgggcctggccgtgtttcatgggcactacata
aacggtggcttcacgctgcccttctacaagcagctcctggggaaacccatccagctttct
gacctggagaccgtggaccccgagctccacaagagcctcgtctggattctagaaaatgac
atcacatctgttctggatcatacgttctgcgtggaacacaacgctttcggcaaattcctc
cagcatgagcttaagcccaacggcagaaacatcccggtgacggaggagaataaaagggaa
tatgtcaggctctacgtgaactggaggttcatgagaggcatcgaggcgcagttcctggct
cttcagaagggcttcaacgagctcatcccacagcacctgctcaagccttttgaccacaag
gaactcgagctgatcattggaggacttgggaagattgatttgagcgactggaaggcgaac
acgcggctgaagcactgcgtggccgacagtaacatagtgaagtggttctggcaggcggtg
gagtcgttcgacgaggagaggaggggcaggttgctccagtttgtcaccggctcgacgcgc
gtccctctccaaggcttcaaagcactgcaaggttctacaggttctgcaggaccaaggctc
tttactatccacttgatcgatgccaacacggacaacttgcccaaagcccacacatgcttc
aaccgcatcgacatcccgccttacgagtcgtacgagaagctctacgagaagctcctgact
gccgtcgaggagacgtgtggcttcgctgtcgagtga |
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