Clarias gariepinus (North African catfish): 128518920
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Entry
128518920 CDS
T10780
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128518920 (snx13)
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
128518920 (snx13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
128518920
NCBI-ProteinID:
XP_053348318
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All DBs
Position
3:complement(31076063..31122051)
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AA seq
973 aa
AA seq
DB search
MFAEASLSVWGWGGLAILLFLITFGPFAIFYLAFYIFCFLGGGFAVTLLFGKTNSEKHLE
KCEHSYLPPTPTGIAKTLEELKQETKPIKIDRRLTGSNFIDEPLQQVIQFALRDYIQYWY
YTLSEDESFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQERLN
EREDPKQRESPEELLDAFFETEVEMERKICRDIVCTSHKDEEGFLRDLCEVLLYLLLPPG
DFHNKNMRYFLREILARGVLLPLINQLSDPDYINQFIIWMIRDSSCNYEAFMNILKLTDK
PAELEAVKDKVQEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCETRIQRLQSGKEVDA
VKLAANFGKLCIIPLDHILVHNIALQFFMDYMQQMGGQAALFFWLTVEGYRVTAQQQLEV
LQSWQKDGRKQSGQTKGLLKAAALGVYEQYLSEKASPRVQVDQASVDRLTEKLNKEDPTP
EIFDDIQRKVYDMMLKDERFYPSFKLHPLYVRMLAELDMLKEPSYRGSDDGDGESFNGSP
TGSINLSLDDLTNATTDESLQLQAFISDTETETHQTRQHFSSLQLSNFGVCNDHGKTYAL
YAITVLRKNPDGSEDSWKTYRRYSDFHDFHMRITEQFENLNSILKLPGKKTFNNMDRDFL
ERRKKDLNAYLQLLLNPEMVKACPMLIPYVHDFLENKAYNKGKGDFARKMDTFVNPLRSS
MRNMSNAVKSLPDSLAEGMTKVSDNMGRMSERLGQDIKQSIFKVPPLIPKSDIDPEHCRV
SAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVD
HVDFMTSPEQVADYVKRFRDSYWPNGILAETPLRRDKNIRMRTRVAAKTNLLGIMPDELK
HIIGAETTRKGILRVFEMFQHQQLNRRLVYVFLEGFLETMFPQYKFPELFIKLHSRSPRI
RTFSQKVRTLQKR
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcagaggccagtctgtctgtctggggatggggaggcctggcaatcctgcttttc
ctcatcacatttggaccctttgcgatattttatttggctttttatatcttctgttttctc
ggcgggggctttgctgtcacgcttttatttggaaagacaaattctgaaaaacacctggag
aaatgtgaacactcctacctgccccccaccccaacaggcatagctaagactttagaggag
ctgaagcaggagacgaaacccatcaaaatcgaccggcgtctgacgggatccaacttcatc
gacgagcctctacagcaggtgattcagtttgctctgagggactacatccagtactggtat
tacacactgagcgaggatgagtccttcctgctggagatccgacagacggtgcagaacgct
cttgtgcagttctctacacggtccaaagaggtggactggcagccatatttcaccaccaga
ctggttgacgacttcgccactcacctccgtgttttcaggaaggcccaggaaaggcttaac
gagagggaggaccccaaacaacgggagtctcccgaggagcttctggatgcgttctttgag
acggaggttgagatggagaggaagatctgcagagatatagtgtgcacctctcataaagat
gaagaagggttcctgcgggatctgtgcgaggtgctgctgtatctcttactacctcctgga
gacttccacaacaagaacatgagatacttcctcagggaaattttggcgagaggagttctg
ctgccgttaattaaccaactaagtgatcctgattatatcaatcagttcatcatctggatg
atccgagactccagctgcaactacgaagccttcatgaacatcctgaagctgacggacaag
ccggctgaactggaggctgtgaaagacaaagtgcaggaggagctccaatatctgcgctca
ctagataccgcaggagatgatatcaacactataaaaaatcaaattaacagtttactcttt
gttaaaaaagtctgtgaaacaagaatacaaagactacaatcaggaaaggaagtcgatgct
gtgaaacttgctgcaaatttcggcaaattgtgtataatcccactggatcatatcctcgtg
cacaacatagcgcttcagttttttatggactacatgcagcagatggggggtcaggcagct
ctgttcttctggctgacggtggagggataccgggtgacagcacagcagcaactcgaggtt
ctacagagctggcagaaggacggcaggaagcagagtggacagactaagggcctgttaaag
gccgctgctctcggggtctatgagcagtacctctcagagaaggcgtctcctagagtgcaa
gtggatcaggcctctgtggacagactcactgagaaactcaacaaagaggatccgacccca
gagattttcgatgacatccagagaaaggtatatgacatgatgttaaaagatgaacggttc
tacccgtcgtttaaactgcaccctctgtatgtgcgaatgctcgctgagttagacatgctg
aaagagccgagctacagaggatcagacgatggagatggagagtcttttaatggatctccg
actggaagcattaatttgtctttggatgacctcacgaatgccaccacagacgagtctctg
cagcttcaggcttttatctctgatactgaaaccgagactcatcagaccaggcaacatttt
tccagtcttcaactgtccaattttggcgtgtgtaatgaccacgggaagacctacgcgctg
tatgccatcaccgtcctccgtaagaacccagacggtagcgaagacagctggaagacctac
cgccgctacagcgacttccacgacttccacatgcgcatcaccgaacagtttgagaacctc
aactcgatattaaaacttcctgggaagaaaacatttaacaacatggacagggacttcctg
gagagaagaaaaaaagacctgaacgcttatttgcagctgcttctgaatccagagatggtg
aaagcctgtcccatgctgataccttacgtccatgacttcctggagaacaaggcgtacaac
aaaggcaagggcgactttgcacgaaagatggacacgtttgtgaaccctctgcgtagttcc
atgaggaacatgtcaaatgctgtgaagtcacttcctgacagcctcgctgaagggatgacc
aaagtgtcggacaacatggggcgcatgtccgagagactgggccaggacatcaagcagtcc
atattcaaggtaccacctttaattccaaagtccgacatcgaccctgagcactgccgagtg
tccgctcagctggatgacaatgtggacgataacatcccactgcgtgtgatgctgctgctg
atggacgaggtgtttgacttgaaggagaggaaccagtggctccgcaggaacatcaagaac
cttctgcaacagctcataagagccacatatggagacaccatcaacaggaaaatcgtggat
catgtagacttcatgacatctccagaacaagtagctgactacgtcaagaggtttagagat
tcctattggccgaacggaatcctagcagagacgccactacgcagagacaagaacatccgc
atgagaacaagagtagcagcaaagactaacctactgggcatcatgccagacgagctaaag
cacatcattggggcagaaactacacgcaagggcatcctccgggttttcgaaatgttccag
catcagcagctaaaccgccgcctggtctacgtcttcctggaggggttcctagaaactatg
ttccctcagtacaagttccccgagctgttcatcaagctgcactcgcgctcaccgcgcatc
cgcactttttcacaaaaagtccgcaccttacaaaaaaggtga
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