Clarias gariepinus (North African catfish): 128518994
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Entry
128518994 CDS
T10780
Symbol
nfatc3a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04020
Calcium signaling pathway
cgar04148
Efferocytosis
cgar04218
Cellular senescence
cgar04310
Wnt signaling pathway
cgar04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128518994 (nfatc3a)
04310 Wnt signaling pathway
128518994 (nfatc3a)
04020 Calcium signaling pathway
128518994 (nfatc3a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128518994 (nfatc3a)
09143 Cell growth and death
04218 Cellular senescence
128518994 (nfatc3a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128518994 (nfatc3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128518994 (nfatc3a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
128518994 (nfatc3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
128518994
NCBI-ProteinID:
XP_053348451
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All DBs
Position
3:6413931..6495969
Genome browser
AA seq
1048 aa
AA seq
DB search
MSSADCSGNEELDFRLMFGEDGQQPPPGPADLEPDDTTSFYILNVGQPPAVLNQPLGVQR
HGVQPHSQVISTSPTLQPLHKPFEPSYESLDSKYLPSGGGGGVGRPPKAFECPSIQITSI
SPSCQQELDGNEADLRSKGVDGDFHERPLSRDHLYLPLDHSYRDSSLSPSPCSSLSSRSW
FSDASSCESISHVYDDVESELNEAAARFTLGSPLASPQGTLLEEQWQQQQHHHHQGYAPL
LSHPHTHSLSPRQSPCHSPRTSVTDENWLSPRPPSRPSSRPTSPCGKRRHSSADICYSGS
PHHSPTPTPGPSPRGSVTEDTWTGSPVGMTPFPCCTPDPDIPSKTRRTSQDCTTTLQTGK
TDLSMDDSGNVSPLRDSPADESVHGVKKDGAGEQFLSVPSHFTWSKPKPGHTPIFRASSL
PPLDWPLPSQYSQFELKIEVHPKAHHRAHYETEGSRGAVKATSGGHPVVKLIGYNEKPVN
LQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEILISSTKVLEIPLLPENNMSASIDC
AGILKLRNSDIELRKGETDIGRKNTRVRMVFRVHIPQPNGKVLSLQAASIPVECSQRSAQ
ELPQVEKFSLSSCPVSGGEEMVITGSNFFPESKVIFLEKGPDGRPQWEVEAKVVREKSQG
SSIVVDVPPYHSKSITSAAQVQFYVCNGKRKRSQSQRFTYLSVLVKQEHRDDLDPSAVPA
MPHAHPVGLGRSPVLPSPDHSHSQDGLVPGSPHGLAPSLHPLQPPCASLHSPTFSHLPHL
QARGLHPPPECQMPFHPGNVPPSRPTYPPLQHNLPFNGQVSLPGASPQAYERVPFQPEPP
GCHPLGMGMVYGSPVSAPASGTGPSSPSHSSSQLHSLGYHGATPGHVTSPTHSIAQPGLQ
LQRSLGYHPVGQRSASCPTPSNAPARMIPLPHSGPSSPQLHSLPYQSPTSSSPASSPLGA
QPSPQASSPVMTGIPTPGPMVHPLAPQQAPFTSEGERLNIKQEPEDKEPTFRSIGLQDIT
LDDVNEIIGRDMSQAPGVHGSSSTLGHS
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgcagactgcagcgggaatgaggagctggacttcaggctgatgttcggagag
gacggccagcagccgccgccaggccctgcagatctggagccggatgacaccacatcgttc
tacatcctgaacgtgggtcagcctccggcagtgttgaaccagcccctaggtgtccagagg
catggagtccagcctcactcacaggtcatctctacttctcctacattgcagcccctccac
aagccctttgagcctagctatgagtccctggactccaaatatcttcccagtggaggtgga
ggaggtgtaggcaggccccccaaggcctttgaatgccccagcatccagatcacctccatc
tccccaagctgccagcaagagctcgacggcaatgaggctgacctccggtctaaaggtgtg
gatggagactttcatgagcgcccgctgtctagggaccacctgtatttgccgctggatcac
tcgtaccgcgattcatcactgagcccaagcccttgcagcagcttgtcttcacgcagctgg
ttctcagacgcttcgtcatgcgagtccatttcacatgtgtacgacgacgtggaatcggag
ctgaacgaagcagcggctcgttttacactcggatctccactcgcttctccacagggcacc
ctgctggaggagcagtggcaacagcagcagcatcaccaccaccagggttatgccccattg
ctttcccacccacatacccactctctttccccacgccagtcaccatgccactcaccgcgc
accagcgtcactgacgagaattggctcagcccacggccaccttcacgtccatcctcgcgg
cccacgtcaccatgcggtaagaggcgacactccagtgcagatatctgctactcgggttca
ccccatcactccccaacaccgacgccgggcccctcgccgagaggcagcgtcaccgaggac
acctggacaggcagtcctgtaggcatgacaccctttccatgctgcactccagaccctgac
atcccctccaaaaccagaagaacatcacaggactgtacaaccacgctacagaccgggaag
accgatctcagcatggacgattcgggaaacgtctcaccgctccgcgattccccggctgac
gaatccgtacacggagtgaaaaaagacggagctggggagcagttcctttcagtgccctct
catttcacatggagcaaacccaaaccaggacacacaccaattttcagggcgtcctccctg
ccccccctggactggcccttgccgagtcaatacagtcagttcgaactgaagatcgaggtt
catcctaaagcccaccaccgggcgcactacgagacggagggcagccgaggagccgtcaaa
gcaacctcaggcggacatcctgtcgtcaagctcatcggctacaacgagaagcccgtaaac
ctgcagatgttcatcgggacagcagacgaccgctatttaagaccgcatgctttctatcag
gttcaccgcatcacaggcaaaacggtggccacggcgagccaggaaatcctgatctctagc
accaaggttctggagattcctctccttcctgagaacaacatgtctgccagtatcgactgc
gcagggattctaaagttgagaaactcagatatcgagctgagaaaaggagagacggacatc
gggcggaaaaatacccgggtgcgcatggtgtttcgggttcatatcccacaacccaacgga
aaagttctctctttacaagctgcctctatccctgtggagtgctcccagcgctcagcacag
gagttacctcaggtggagaagttcagtttgagcagttgtccggtcagtggaggagaggaa
atggtcatcacaggatcaaacttcttccctgagtcgaaggtcatcttcctggagaaagga
cctgatggacgaccacagtgggaggtggaagccaaggtcgttcgagaaaagagtcaagga
tcaagcattgtagtagacgttccaccgtaccacagcaagagtatcacgtccgcagcgcag
gtgcagttctacgtgtgtaatgggaagcggaaaaggagccaatcacaacgattcacctac
ctgtcagtcctggttaaacaggagcaccgagatgatttggacccctcagctgtgccggcc
atgcctcatgcgcatcctgtcggcctgggtcgttctccggtcctgccatccccggaccac
tctcattcacaggatgggcttgtgccaggctctccgcatggcctggcaccttctctgcac
ccactccagccaccctgtgcatctcttcactcacctaccttctctcacctgcctcacctc
caggcccgaggtcttcacccacctcctgaatgccagatgcctttccatccaggcaatgtg
cccccgtctaggccgacgtacccccctctccagcacaacctacccttcaacggccaagtg
agtctaccaggagctagcccccaggcctacgagcgtgtgccctttcagcctgagccacct
ggatgccaccctttgggaatgggcatggtgtatggctccccggtttcggctcctgcctct
ggaaccggcccttcaagccctagccactcttcctctcaacttcattctctgggctatcac
ggtgccaccccaggccacgtgacgtcacccacccactccatcgctcaacccggactgcag
cttcagcgctcgctcggctaccatccagtcgggcaacgttcggcttcgtgcccaacgccc
tctaacgcccctgcccgaatgatacccctgccccattcaggtccatcctctcctcagctg
cactcactgccctaccagtcacccacctcgtcttctcctgccagcagccctctgggagcc
cagccctcaccccaggccagcagtcctgtcatgacagggattccaactccaggacccatg
gtgcatccgctggcaccacaacaagccccgtttaccagcgaaggagagaggctcaacatc
aaacaggaaccagaggacaaagagcccacgttccgctctataggcctgcaggatattaca
ctggatgatgtgaacgagatcatcggcagagacatgtctcaggctccgggggttcacgga
tcctcaagcacgctcggccactcgtag
DBGET
integrated database retrieval system
