Clarias gariepinus (North African catfish): 128518995
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Entry
128518995 CDS
T10780
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00270
Cysteine and methionine metabolism
cgar01100
Metabolic pathways
Module
cgar_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
128518995 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128518995 (dnmt1)
03032 DNA replication proteins [BR:
cgar03032
]
128518995 (dnmt1)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128518995 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
cgar02048
]
128518995 (dnmt1)
Enzymes [BR:
cgar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
128518995 (dnmt1)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
128518995 (dnmt1)
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
128518995 (dnmt1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
128518995 (dnmt1)
Prokaryotic defense system [BR:
cgar02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
128518995 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
zf-CXXC
DMAP_binding
Motif
Other DBs
NCBI-GeneID:
128518995
NCBI-ProteinID:
XP_053348452
LinkDB
All DBs
Position
3:32159514..32174905
Genome browser
AA seq
1507 aa
AA seq
DB search
MPTRTSLCLPEDVKERLQALDKGDDSLSDEDCVKEKIRLLQDFLHDDTQDQLKDLELKLK
NSELTTEVYTSEVKAVLKKALGLGKEGHSDGAEQNGHSNGFSENGSHKDNGEKQGAMETQ
EEGETMKSPSTSKGRGGRRSKADSEPKKSPASSRVTRNSGKQQTILSMFSRVPKRKSDEV
NGETTNGDAEVNPEEPDAEETREEKRLKTEEDEKPSTENSCVEKTKPVNTAKTPPPKCPD
CRQYLDDSDLKFFQGDPDDALDEPEMLTDERLSLFDSNEDGFESYDDLPQHKITSFSVYD
KRGHLCPFDSGLIEKNVELYFSCAVKPIYDDNPCMDGGVPAKKLGPINAWWITGFDGGEK
ALIGFTTAFADYILMEPSEEYSQIFALMQEKIYMSKIVVEFLQKNPDATYEDLLNKIETT
VPPAGLNFNRFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAGVTLGK
RRAARRQAIRHPTKIEKDVKGPTKATTTKLVYQIFDAFFAEQIDQNNKDGGGAKRQRCGV
CEVCQASDCGKCSSCKDMIKFGGSGRSKQACQKRRCPNMAVKEAEDDENIDEEDVVLLLK
DASKKMSQAKKKQTKNKITWVGDPIRTEGKRDYYMKVRVENEVLEVGDCVSVSPDDPSHP
LYLARITALWDEGEKMFHAHWFCRGTDTVLGESSDPLELFLVDECEDMQLSFVHGKVNML
YKAPSEDWFMEGGLVDEIKVIEDDGKSFFYQLWYDGDFARFETPPKVIPEEDSKYKFCAS
CTRNKEQQEQEIPRVFDPIEDEERDTKVLYSLACLKGEQYRVGDGVYLPPEAFNFGVKAA
SPVKRPHRKEDVDEDLYPEYYRKSSDYIKGSNLDAPEPFRIGRIKEIYCTKRSNGKPDQS
EVKLRLYKFYRPENTHKGPKAGYHTDINQLYWSDEEVSVNMADVLGRCRVEYGEDLVESV
QDYCSGGPDRFYFLEAYSAKSKSFEDPPNHARSVVNKGKGKGKGKGKGKGKASSQDAQEQ
ETPAIKAPKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGTTVFTE
DCNVLLKLVMSGEKTNSLGQKLPQRGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVV
SYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQT
RRRAIILAAAPGEKLPRYPEPLHVFAPRACSLSVVVDDKKFVSNVTRGNGGIYRTITVRD
TMSDLPEIRNGASALEISYNGEPQSWFQRHIRGAQYQPILRDHICKDMSALVEARMRHIP
LAPGSDWRDLPNIEVRLRDGTTTKKLRYTHLDKKNGRSGTGALRGVCTCAGGKPCDPADR
QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV
RECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSKAIGLEIKKCVEEKMKENATEPVKQ
EKMEVCE
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccaggacttcgctgtgtttgccggaggatgtgaaagaacggttgcaagctctg
gataaaggtgatgacagcttgtcggatgaggattgtgtgaaggagaagatcaggttactg
caggacttcctgcatgatgacactcaggaccaacttaaagaccttgagctcaaactgaaa
aactctgaacttaccacagaggtgtacacatctgaagtaaaagctgtgctgaagaaggct
ttaggtttgggcaaggaaggtcacagtgatggagcagagcagaacgggcactccaacggc
ttctctgaaaatggatctcataaagataacggtgaaaaacaaggggctatggaaactcag
gaggaaggagaaaccatgaaatctcccagcacatcaaagggccggggtggcagacgcagt
aaagcagactctgagcctaaaaaatctcctgcaagctcaagggtcacacgcaactctgga
aagcaacaaaccatcctgtccatgttctcaagagtgcccaaacgcaagtctgatgaggtg
aatggtgagactacaaatggtgatgcagaggttaaccctgaggaacctgatgctgaggag
actcgtgaggaaaagcgtcttaaaactgaagaggatgaaaaaccaagtactgaaaattct
tgtgttgagaagaccaagcctgtgaacacagccaagacacctccacctaagtgtcctgat
tgcaggcagtacctggatgactctgacctcaagtttttccagggagatcctgatgatgct
cttgatgaaccagagatgttaacagatgagcgcctttctttgtttgattcgaatgaagat
ggatttgaaagttatgatgacctgcctcaacacaagattacaagctttagcgtctatgac
aaacggggccacctatgtccttttgattctggactcattgagaaaaatgttgaattgtac
ttcagttgtgcagtcaagcccatctatgatgacaatccttgtatggatggtggtgttcct
gctaaaaagctgggccccatcaatgcttggtggattactggctttgatggaggagagaaa
gctctgattggcttcaccacagcgtttgctgattacatcctaatggaaccaagtgaggaa
tactctcaaatctttgctctgatgcaggagaagatctacatgagtaagattgtggttgaa
tttcttcagaaaaatccagatgctacatatgaggacttgcttaacaaaattgagaccaca
gttcccccggctgggctaaacttcaatcgttttaccgaggacactctcctgcgccatgct
cagtttgttgtggagcaggtggaaagctacgatgaagctggagattcggatgagcagccc
atcatcgtcaccccatgcatgagggacctaattaaacttgctggtgtcaccctgggcaag
aggagggcagccagaagacaagctattcgtcatcctacaaagatagagaaggatgtcaag
ggtccgacaaaagctactacaacaaaacttgtgtatcagatcttcgatgccttttttgca
gagcagattgatcaaaacaataaggacgggggaggtgccaagaggcaacgctgtggggtc
tgtgaggtgtgccaagcttctgattgtggcaaatgttcttcatgtaaggacatgatcaag
tttggaggcagtggtcgcagcaagcaggcttgtcaaaagagaagatgtcccaacatggca
gtgaaggaagcagaagatgatgagaatatagacgaggaagatgttgtactgctccttaaa
gatgcatccaaaaagatgtctcaagccaagaaaaagcagaccaaaaataagatcacctgg
gtgggagaccccattaggactgaaggaaaacgtgactattatatgaaggtgcgtgtggaa
aatgaggtcctggaagttggagactgtgtgtctgtcagcccagatgacccctcacatccg
ctctaccttgccaggattacagctttgtgggatgaaggggaaaagatgtttcatgcgcac
tggttttgccgtggcacagacactgttcttggcgagtcctctgaccctttggaactcttc
cttgtagatgagtgtgaggacatgcagctcagctttgtgcatggtaaagtcaacatgctc
tacaaggctccttcagaggactggttcatggagggtggtcttgttgatgagataaaggtc
attgaggatgatggaaaaagcttcttttatcagttatggtacgatggggattttgctcgg
tttgaaacgccacccaaggttattccagaggaagactccaaatacaagttctgtgctagt
tgcactagaaataaagaacagcaggagcaggagatacctcgtgtctttgatcctattgaa
gatgaggaacgtgacactaaggtcttgtattccctggcttgcctgaagggggagcaatac
cgagtgggagacggtgtgtacttgccacctgaggcattcaactttggggtaaaagctgca
agcccagtaaaacgtcctcaccgaaaagaggatgtggatgaggacctttatccagaatac
tacaggaagtcctcggactacatcaagggatccaatctagatgctccagagcccttccgt
attgggcgcattaaagagatctactgcaccaagcgcagcaacggcaagccagatcaatca
gaggtcaaactgcgcctctacaaattctatagaccagagaatactcacaaggggccaaag
gcagggtaccacactgatataaaccagctttactggagcgatgaagaggtgtctgtgaac
atggcagatgtactgggtcgttgtcgtgtggagtatggcgaggatctggtggagagtgtg
caggactactgcagcggtggacctgatcggttctacttcctagaggcctacagtgccaaa
tcaaaatcctttgaagacccaccaaaccatgcacgctctgttgtaaacaagggcaagggg
aaaggaaagggaaaaggtaaagggaaaggaaaagcttcctcacaggatgcccaagagcag
gagactccagcaatcaaagcccctaaactgcgcacactggatgttttctccggctgtggt
ggtctatctgaaggcttccaccaagcaggtatttctgagaccctctgggctattgaaatg
tgggatcctgctgcgcaggccttcaggctgaataacccaggcaccacagtgttcactgaa
gactgcaatgttctgctgaagctggtaatgtctggagagaagactaactcacttggccaa
aaactgccacaaagaggtgacgtggagatgctgtgtggagggccgccatgccaaggcttc
agtggaatgaaccgcttcaattcgcgcacatactcaaagtttaagaactcccttgttgtc
tcttatctgagttactgtgactactacaggccaaagttcttcttgttggagaacgtcaga
aactttgtgtcctttaagcgctccatggtcttgaaactcactctgcgttgcctagtgcgt
atgggctatcagtgcacatttggtgtacttcaagcagggcagtatggggtggcccaaaca
cggcgtagagcaattatactggctgctgctccaggtgagaaactccctcgctacccagag
ccactgcatgtatttgctccaagagcgtgctctctcagcgtagtggttgatgacaaaaaa
tttgtctccaacgtaaccagagggaatggtggtatctatcgaaccattacagtccgggac
acaatgtctgacctcccagagatccgtaatggagcctctgctctggagatctcttacaac
ggcgagccacaatcctggttccagcgacatattcggggtgcacaataccagcccattctc
agggaccatatatgcaaggacatgagtgccctggtagaagcacgtatgcgtcacatccct
ttggcgccagggtcggactggagagatctgcctaacattgaggtgcggctacgggatgga
accacaacaaagaagcttcgttacacacacttggacaagaaaaacggccgcagtggcact
ggtgcactgagaggagtgtgtacttgtgctggaggtaaaccatgtgacccagcagacagg
cagttcaacacactgatcccatggtgtttgcctcacacgggtaatcgccataaccactgg
gctggactatatggcaggctggagtgggatggcttcttcagcaccactgttaccaaccct
gagcccatgggcaagcagggacgcgtgctacatccagagcagcaccgcgtggtcagcgtt
agagaatgtgctcgctcacaaggtttcccagatacgtatcgattcttcggcaacatcctg
gacaagcacagacaggttggaaacgcagttcctccacctctgtcaaaagccattggactt
gaaattaagaaatgcgttgaggagaagatgaaggagaatgctacagagcctgtaaaacag
gagaagatggaggtatgcgagtag
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integrated database retrieval system
