Clarias gariepinus (North African catfish): 128519057
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Entry
128519057 CDS
T10780
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04136
Autophagy - other
cgar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128519057 (wipi2)
04136 Autophagy - other
128519057 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128519057 (wipi2)
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128519057 (wipi2)
Membrane trafficking [BR:
cgar04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
128519057 (wipi2)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128519057 (wipi2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_Prp19
BCAS3_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
DUF7165
Beta-prop_Vps41
Beta-prop_IFT140_1st
Trehalase_C
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
128519057
NCBI-ProteinID:
XP_053348588
LinkDB
All DBs
Position
3:20296316..20303941
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AA seq
455 aa
AA seq
DB search
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCSLSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQREKPQEEPTTWTGYFGKVLMASTTYLPAQVSEMFTQGR
AFATVRLPFSGHKNICALAVIQKIPRLLVAASDGYLYLYNLDPQEGGECTLMKQHKLDGS
AEPANEILEQTCHERPLVAQTYSTAIAKGTKHFHFCSSLFNPVCVTRTRLCCFFVFHPGY
PEDQGAVGGAGVEDDINALHLDEENEQPPLILETD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggagaggccggctgcagccagctgctcttcgccaacttt
aaccaggacaacacgtccttagctgttggtacaaaatcaggatacaagtttttctctttg
tcatcggttgacaaattggaacagatttacgaatgcactgacacagaagatgtgtgtatc
gtggaaagactgttctccagtagccttgttgctattgtgagcctcaaggcacctaggaag
ctcaaagtctgtcatttcaagaagggaactgagatctgtaactacagctactctaacact
atactggctgtaaaactaaacagacagaggttgatagtatgtctggaagaatcactgtac
atccacaacatcagggatatgaaagtgctgcatacaatccgggagactcctccaaaccca
tcaggattgtgctcgctttcgatcagcaacgacaactgctacctggcgtatccaggaagt
gcgacgataggcgaagtgcaggtttttgacactgttaatctgagagctgctaatatgatc
cccgctcatgacagcccgttagcggccctggctttcgacgcgagcggaacaaaactagcc
acggcttctgagaagggaaccgtcatccgtgtgttctccattccagaaggccagaagctc
tttgagttcaggaggggagttaagagatgtgtgagtatctgctcgctggccttcagtatg
gaaggactttatctatctgcctcgagcaacaccgagacagttcatatcttcaagctggag
acacagagagaaaagccgcaggaggaacccaccacttggacgggctacttcgggaaagta
ctgatggcgtcgaccacgtacctgcctgctcaggtgtctgagatgttcacgcaggggcgg
gccttcgccaccgtcagactgccattttcaggacacaagaacatctgtgctctggccgta
atccagaagattccgcgtcttttggtggcggcgtccgacggctacctgtacctgtacaac
ctagacccacaggagggtggggagtgtaccctcatgaagcagcacaaattagatggaagc
gctgaacctgcaaatgaaattctggagcagacatgtcatgagcgcccactagtggcacaa
acctacagcactgccattgccaaaggtacaaaacactttcatttttgtagctctttgttt
aaccctgtgtgtgtaacacgtacacgactatgttgtttttttgtttttcatccaggttac
cctgaggatcagggagcagtgggtggagccggcgtggaagacgacatcaacgccctgcac
ctggatgaagaaaacgagcagcctccgctaatcctggagacggactga
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