Clarias gariepinus (North African catfish): 128519100
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Entry
128519100 CDS
T10780
Symbol
gatad2b
Name
(RefSeq) transcriptional repressor p66-beta
KO
K23194
transcriptional repressor p66
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128519100 (gatad2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128519100 (gatad2b)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128519100 (gatad2b)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
128519100 (gatad2b)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
128519100 (gatad2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
128519100
NCBI-ProteinID:
XP_053348656
LinkDB
All DBs
Position
3
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AA seq
628 aa
AA seq
DB search
MERMSEEALRLNLLKRGLETADEREEALAKRLKMEGHEAMERLKMLALLKRKDLAALEGA
AMAEGKGPGISQGLMGASAIYEEKLNGSLRSTGHGGPSKNGKENMMDEPVDMSAKRSGVE
RERCTPSPDVIILSDNEASSPRSTPHPEERRHHPNLDMFKGKTGEERQQMIKALREELRL
EEARLVLLKKLRQSQMQKENVVQKVPVVQNPPSTVQPSTIHSSQGLTKLPVRPGMHTSEP
QNLRTAQGHTVIRSAASASLPPMMMSQRVIAPNPAQLQGQRLPSKPGMGRPSTGSMSNAI
NYQQAASQQVAASQRSGSSAAIYMNLAHMQAAGAAGVPGVGVGVSAVSPSALPGSSSVGS
VGSLSDQASSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPSAANSEFIYMVGLEEVV
QSVLDSQGKIRGSLSRMEPFFCAQCRTDFTPHWKQEKSGRILCEQCMTSNQKKALKAEHT
NRLKNAFVKALQQEQEIEQRLQQQAALSPSAAQTVPSVSKAESMIRHHALRQAPQPQAAL
ARGLSGFAQASQLSVASGLLGMTSKRCGGGGSRSQHESRRQIYNIPGLNIAYLNPGGHKA
SSLADRQREYLLDMIPPRSISQSITGQK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatgtccgaggaggcgttgaggttgaacttgctgaagcggggtctggaaacg
gccgacgagagggaggaagcgctggccaagcgcctgaaaatggagggtcacgaggctatg
gagcgactgaagatgctggcgttgctcaagcgcaaggacctcgccgctctcgaaggagcc
gccatggcagaaggaaaaggacccgggatcagccaggggctgatgggcgcttcggcgata
tacgaggagaagctgaacgggagtctgaggagcacgggtcatggaggacccagcaagaac
gggaaagagaacatgatggacgaaccggtggacatgagcgccaagagaagcggtgtggag
cgagagaggtgtactccatctccagatgtgattatcttgtcagataatgaagcgtcaagc
ccgaggagcactccgcacccagaggagcgccgccatcaccctaacctagacatgttcaag
gggaagacgggtgaggagaggcaacagatgatcaaagccctacgtgaggagctgaggctg
gaggaggccaggctcgtgctgctgaagaagctgagacaaagccagatgcagaaagagaac
gtcgtacagaaggttccagtcgtccagaatcccccctccaccgtgcagccttccaccatc
cacagttcacaggggctgaccaaactgcctgtgcggcccggcatgcacacctccgagccc
cagaacctccgcacagcccagggccacacggtgatcaggtctgcagccagtgcctccctg
ccccccatgatgatgtctcagcgagtgatcgctcctaacccagcccagctgcagggacag
agattgccctctaagcctggcatgggccgaccctctacaggaagcatgagcaatgcaatc
aattaccagcaggctgctagtcaacaggtggcggcctcacagcgttccggctcctcggcg
gccatctacatgaacctggctcacatgcaggcagccggggcagcaggtgtgccaggcgtc
ggggtgggcgtgagtgcagttagcccctccgcacttcccggcagctccagcgtgggctca
gtgggcagtttgagcgatcaggccagcagccaggcagccgccaagctggcattgcgcaag
cagctggagaaaacactgctggagatccctccacccaaacctcccgcacccctgctccac
ttcctaccttctgccgccaacagcgagttcatctacatggtgggactggaggaggtggtt
cagagtgtcctcgacagccagggtaaaataaggggttccctttcgcgcatggagccgttc
ttctgcgcccagtgcaggaccgacttcaccccccactggaagcaggagaaaagcggtcgc
atcctgtgcgagcagtgcatgacctccaaccagaagaaggccctaaaggctgaacacacc
aaccgtctgaaaaacgccttcgtcaaagccctgcaacaggagcaggaaatcgagcagagg
cttcagcagcaggcggctctgtccccgagcgcagctcagaccgtccccagcgtcagcaag
gctgagagcatgatccgacaccacgccctccgacaggctccgcaaccacaggcggccctt
gcgcggggtctatccggcttcgcccaggcgtcgcagctctcggtggccagcggcctgttg
ggtatgaccagcaaacgctgcggaggaggcggcagtcggtcgcagcatgagagccgccga
cagatttacaacatcccaggcttgaatatcgcctatttgaacccaggaggccacaaggca
tcgagcctggcggaccggcagagggagtatctgctagacatgatccccccacgctccata
tctcaatccatcactggccagaaatga
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