Clarias gariepinus (North African catfish): 128519131
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Entry
128519131 CDS
T10780
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128519131 (irx5a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
128519131 (irx5a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
MRP-S32
Motif
Other DBs
NCBI-GeneID:
128519131
NCBI-ProteinID:
XP_053348699
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All DBs
Position
3:5758793..5762226
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AA seq
450 aa
AA seq
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MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEEIGRSSSGSAFAPYAGSTAFSSASAA
YSSHLPYGADAAAAAATFTSYVSSPYDHTSGMAGSIGYHPYAAPLGSYPYGDPAYRKNAT
RDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTP
RNRSEDEEEDENIDLEKNDDDEPNKPIDKGDSTDTETDPKILHVGEAPCDRFQDDHHGKD
SDPLLSDSDLKEADERADPSKATTSSPSLVQRAHELGVHDRPPEVVHGASAVNHSNATSV
IHSPPSAPKPKLWSLAEIATSSDRCRGGGGGGSGGGDAGATVQSALPAASAASPSRTSTQ
CALPSGAVLSRPLYYTSPFYAGYTNYGSFSHLHSSHGSVTSSAATHFNGISPSVLNRAEA
LARESKARSQVQVDLCKDSPYELKKGMSNI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccctcagggctacttgtatcagccgtccgcctctttggcgctctactcgtgt
ccggcgtacagcacgagcgtgatctcgggcccgcgcaccgaagagatcggcagatcgtct
tcaggctcagcattcgcaccctacgccggatccacggcgtttagcagcgcctcagctgcc
tacagctcgcatctgccgtacggagcagacgccgccgccgccgccgccacttttacctcc
tacgtgagttccccctatgatcacacgtcaggcatggctggctctattggttatcacccg
tacgcagctccactgggttcatacccgtacggtgaccctgcgtaccgtaagaacgcgacc
cgggacgccacggcgactctgaaagcctggctgaatgagcaccgcaagaacccatatcct
accaagggcgagaagatcatgctggccatcatcactaagatgaccctcacgcaggtgtcc
acctggtttgccaacgcccggaggagactgaagaaggagaacaagatgacctggacgcct
cgcaacaggagcgaggacgaggaagaggacgagaacatcgacctggagaaaaacgacgac
gacgagcctaacaagcctattgacaagggagactcgacagatacggagacagatccaaaa
atcctgcacgtgggcgaggcgccatgtgacagatttcaagacgaccaccacggcaaagac
tcggaccctttgctcagcgactcggacttgaaagaggcggacgagcgcgcagacccgtcg
aaagccacgacgtcctcgccgtcgctcgtgcagcgggcacacgagctcggtgtgcacgac
aggccgccggaagtggtgcacggcgcctccgcggtcaatcacagcaacgctacgtccgtt
atccactctcctccgtccgcgccaaagcctaaactgtggtctctggcggaaatagccacg
tcttcggacaggtgcagaggaggaggaggaggaggaagcggcggcggtgacgcaggggcc
accgttcagagcgcgctaccagcggccagcgctgcttctccgagccggacctcgacacag
tgcgcgctcccgagtggcgccgtgctctcccggcctctctattacacgtcgccgttttac
gcgggctacacgaactacggctctttcagccacctgcacagcagccacggctcagtcacg
agctcggcagcgacgcacttcaacggaataagtccaagcgttttaaaccgagccgaggct
cttgcccgagaaagcaaagcaaggagccaagtgcaggtagacctttgcaaagactcccct
tatgaactaaagaaaggtatgtccaacatttaa
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