Clarias gariepinus (North African catfish): 128519139
Help
Entry
128519139 CDS
T10780
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128519139 (vps50)
Membrane trafficking [BR:
cgar04131
]
Protein recycling
Others
EARP complex
128519139 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
128519139
NCBI-ProteinID:
XP_053348710
LinkDB
All DBs
Position
3:27793610..27945269
Genome browser
AA seq
965 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADMSPVESFRVPSKEELRELREQPIDPQAEQEIIDSIEEV
YYSNDSIDMVQYELENLPPDLNLQELEDYRDKLKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTTLQLAAVICTNARRQLALSKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVAHYTRVQLAYSLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITPDSYIPCLTDLCKALWEVMLSYYRTMQWHEEHDKEEMKDADTD
GTNNEGSEESTVGHSYVKKKLEHGLSRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVI
SRLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFS
ITQLHEFKFMGQCRSPSVSPSRQPASSDPEELSLFEQYILEGNPFEMQIDNKEEESEDVL
ESNGYESEELEKSVYQDYDSDSDVADELKQDFVDEQTGDIPNKSVSRETLRSRKRSDYNL
NKANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDM
YESSGLGLISSRLRTTLNRIQESLIDMEAGGENTATHGSSEDRKEKVPSPHLSQLVVLTS
SSTLYGLAERVVATESLVFLAEQFELLQPHLDTMMPPAKKPFLQQFYSQTVSTASELRKP
TYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNVYVDVLLKEFEEFNKKLGDVSKQVRI
PLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPIPD
KEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAIDDI
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaattaaatctttaatggcccgacagggcttgaaaagcccccaagagagtatg
gcagatatgagtcctgtggagagcttcagggtcccgagtaaggaggagctgagggagctg
agggagcagcctattgatccgcaggctgagcaagagatcatcgacagcatagaggaggtg
tactattccaacgactccattgacatggtgcagtacgagcttgagaatcttcccccagac
ctgaacctgcaggagctggaagactacagagataagctcaaaagacagcaagcagctgtt
tcaaaaaaagttgctgaccttattctagagaagcagccatcctatgttaaggaactggag
cgagtaacttctctgcaaaccacattgcaactggctgctgttatctgcaccaatgctcgg
aggcagcttgcgctttctaaagaaggcttcaccgaagcaagtcttggactcctggccaac
cagagacgcaggcagctgttaacaggattgttaaagtctttaaggaccataaagacactg
caaaggacagatgtcagactaagtgagatgctggaggaggaggattatccaggtgcgatc
cagttgtgtctggaatgtcagaaggccgccagtactttcaagcactacagctgcataagt
gagttaaactcgaagctgcaagacactctggaacaaatcgaggagcagctggatgtagca
ctgtcgaaaacctgcaagcactttgacgtcgctcactacaccagagttcagcttgcgtac
tcactcttgggcaagacacagacggcgatggatcagcttcacatgcacttcacccaggcc
attcacaacactgtgttccaggtggtgcttggatatgtggagctgtgtgccggcaacgct
gataccaaatttcagaagatgcagtataaagatctgtgcacgcacatcactccagacagc
tacatcccctgtttgactgacctgtgcaaagcgttgtgggaggtgatgctcagttactac
cgaaccatgcagtggcatgaggagcatgacaaagaggagatgaaggatgctgacacagat
ggtacaaacaacgaaggttcagaggaatctactgttggccacagctatgtgaagaaaaag
cttgaacatggcctaagccggatttggcaggacgtccagctgaaagtgaaagcctattta
cttggaacagacatgtccaacttcaagtatgatgacttcattgtggtgctggatgttatt
agcagactaatgcaggtgggagaggaattttgtggcagcaagtctgaggtgctacaggag
tcaattaagcggcagagtgtgaactactttaagaactatcacagaacacgcctagaggaa
ttgcgcatgtttctggaaaacgaaacctgggagttgtgtcccgtgaagtccaacttcagt
atcactcaacttcacgagtttaagttcatgggtcagtgtcgttcgccgtcggtgtctccg
agcaggcagccagcctccagtgaccctgaggagctatctctatttgagcagtatatcctg
gagggaaacccttttgagatgcagatcgacaataaagaagaggagagcgaggatgttctg
gagtccaatgggtacgagtctgaagagctggaaaagagtgtatatcaggactatgacagt
gacagtgatgtggcggatgaactgaagcaggactttgtggatgagcagaccggagacata
cccaacaagagtgtttccagagagacgctgcgcagccgaaaaagatctgactacaacctg
aacaaagcgaacgcccccatcctgaccaacaccacacttaacgtgatccgtctggtcggc
aaatacatgcagatgatgaacattttaaaacccatcgccttcgacgtcatccactgcgtg
tcccagctgtttgattattacctgtacgccgtgtacaccttcttcggccgcaacgacatg
tatgaatcatccggactggggctgattagcagtagactgaggacgacactcaaccgcatc
caagagtctctcatagacatggaggcaggaggagagaacactgccacccacggatcctct
gaggacagaaaggagaaggtgcccagccctcacctgagccagctggtggttctgacatcc
agcagcacactgtatgggctggcagagcgggtagtcgccacagagtcacttgtgttcttg
gccgagcagtttgagctccttcagcctcatttggacaccatgatgcctccagcgaaaaag
cctttcctgcagcagttctactcccagaccgtgtccacagccagcgagttacgcaagccc
acttactggatagtggcagctaaagccattgattatgagcagatgctgctgctgatggca
ggagtgaaatgggacattaaagagataatgtcacagcacaacgtctatgtggatgtcctt
ttaaaggaatttgaggaattcaataaaaagcttggtgatgtctccaaacaagtgaggatc
cccctgcctgtatcaaacgtcctctgggagcactgtatccgcctggcaaaccgaacacta
gtggagggttacgccaacgtgaagaagtgcagtaatgagggccgagcactgatgcagcta
gacttccagcagttcctcatgaagctggagaagctcaccgacctcagacccatccctgat
aaagagtttgtggagacctacattaaagcctactacctgactgagaacgacatggagcag
tttattaaaaaccacagggaatactccatgaagcagctggccaacctggtcaacgtctgc
ctcggctcccacatcaacaaaaaggccaggcagaaactcctcgcagctatcgatgacatt
gaccgaccaaaaagataa
DBGET
integrated database retrieval system
