Clarias gariepinus (North African catfish): 128519149
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Entry
128519149 CDS
T10780
Symbol
matn1
Name
(RefSeq) cartilage matrix protein isoform X1
KO
K19467
matrilin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128519149 (matn1)
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
128519149 (matn1)
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GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
VWA_3
cEGF
EGF_CA
EGF
EGF_3
EGF_LRP2
vWA_SIBA-E
Plasmod_Pvs28
hEGF
Dabb
Copine
Motif
Other DBs
NCBI-GeneID:
128519149
NCBI-ProteinID:
XP_053348727
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All DBs
Position
3:complement(23872393..23878786)
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AA seq
489 aa
AA seq
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MALLGFVMLLCILGAQATLDHRLVEAAAMASGLCQTKPTDLVFIIDSSRSVRPSEFEQVK
VFLNKIIDGLDVGPDATRVSVVNYASRVKNEVSLKSYKTKPALIKAVSKIEPLSSGTMTG
LAIQFAMNVAFSEAEGARTKSPGISKVAIIVTDGRPQDNIRDIAAKARDSGIEIYAIGVG
RVDMNTLRQIASEPLDEHTDYVESYSFIEKLTQKFKEAFCVSDLCATGDHDCEHICISVP
GSFKCACREGYTLREDGRSCSACSDAATDVVFLIDGSKSVRPENFELVKKFINQMVDKLD
VSERNVHVGLVQYSSAVKQEFSLGKYNNKKDVKEGVRKMDYMERGTMTGQALNFMVEKSF
STGHGARPGAAKVGIVFTDGRSQDYIGDAAKKAKDNGFKMYAVGVGNAVEDELKEIASEP
GNYFYTADFKAMNEIGKKLQINTCPVPENPCECQSLTKFQKKVEEALQALSKKLEAITKR
ISALENKIV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgctagggtttgtgatgctactgtgcatactgggggctcaagccacgctggac
catcgattggttgaagctgctgccatggcatcgggactgtgtcagaccaaacctactgac
ctggtgttcattattgacagctctcggagtgtgcggccttccgagttcgagcaggtcaag
gtgttccttaataaaataatagacggtctggatgtgggtcccgatgccacacgtgtgagt
gttgtgaactatgccagcagggtgaagaatgaagtgtcactgaagtcctacaagacaaag
cctgcactgatcaaggcggtatccaaaatcgagccgctctcctctggcactatgactggc
ttggctatccagtttgctatgaacgtggccttcagtgaagcagagggtgcgcgaaccaaa
tcccctggtatcagcaaggtagcaatcattgtgacagatgggcggccacaggacaatatc
cgtgacattgcagccaaggcacgggactcaggcattgagatatatgccatcggtgtgggc
cgagtggacatgaacacgctcaggcagatagccagtgagcctttggatgagcacactgat
tatgtggagagctacagcttcatcgagaagctcacccagaagttcaaggaagccttttgt
gtgtccgacttgtgcgcaacaggtgatcatgactgtgagcacatttgcatcagtgtacct
ggatcgttcaagtgtgcctgccgggagggctacacactcagggaagatggccgttcctgc
agcgcctgcagtgatgctgccacagatgtggtcttcctgattgatggatcaaaaagtgta
aggccagaaaactttgagctggtaaagaagtttatcaaccagatggtggacaagctggat
gtgtcagagagaaacgttcatgtgggtctggtgcagtactctagtgctgtcaaacaggag
ttttctcttggaaagtacaacaacaagaaagacgtcaaggagggcgtgaggaagatggac
tacatggagcgtggaaccatgactggacaggctctcaacttcatggtggaaaaaagcttt
agtaccggccatggtgctaggcctggggcagccaaggtgggcatcgtcttcactgacggc
aggtcacaagactacattggagatgctgcaaagaaggccaaggacaacggctttaagatg
tatgctgtaggagttggaaacgcagtcgaagacgagttgaaggaaatcgcctcagaacct
ggaaactatttctatactgctgacttcaaagccatgaacgagatcggcaaaaagctgcaa
atcaacacttgtccagtacctgagaatccctgcgaatgtcagtctcttacaaagttccag
aaaaaagtggaggaggcactccaggcattatcaaagaaattggaggcaataacaaagagg
atctctgccctggaaaacaaaattgtgtga
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