Clarias gariepinus (North African catfish): 128519180
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Entry
128519180 CDS
T10780
Symbol
samd1a
Name
(RefSeq) sterile alpha motif domain containing 1a
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128519180 (samd1a)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
128519180 (samd1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
DUF755
Motif
Other DBs
NCBI-GeneID:
128519180
NCBI-ProteinID:
XP_053348782
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All DBs
Position
3:34006394..34017286
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AA seq
399 aa
AA seq
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MSEPRYREWILDTIDSLRSRKARPDLERICRMVRRRHGSDPDRTCVELERLIQEHAVLKV
NYKGSVSYRNAAKVQRGRRRSEQAAGKKSSSSTSSSPSSSSSSSSCTSIKQASPAELHNS
DSAQGPAADDPMEDMEDELSTTAGMDSSMDEEEASLDAPCMQIQSSADSGISLSPIMTSG
ESEVTRSSPTPSKTGSSCHSTPEKDRDAARVSPERTQPASQQDTGSPELEAVLQPAAICP
SAQRSALTREEEPRAGENALTPDQLLSNCMHQDEVVGLDPLEEGKKCNNLDDVVHSQVTE
TAKNGEMMKEGLFNAEEMTQDLLKWSVADVVSYFTAVGFPEQAVAFRTQEIDGKSLLLMQ
RSDVLTGLSIRLGPALKIYEHHVKVLQRSHFQEHNDVFS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagccgcggtaccgtgagtggatcctggacaccatagactcgctgaggtcgagg
aaagcgcgaccggacttggagcggatctgccggatggtccgcaggaggcacggctctgat
ccggaccgcacgtgcgttgagctcgagagactcatccaggagcacgcggtgctcaaagtc
aactacaagggctcggtgtcgtaccgcaacgcggctaaagtgcagcgcggcaggcggaga
agcgagcaggcggcgggcaagaagtcgtcttcctccacctcgtcttctccttcttcctca
tcatcttcatcttcttgcacctccatcaagcaggcttcaccggcggagctgcacaacagc
gacagcgcgcagggtcccgccgccgacgacccgatggaggacatggaagacgagctgtcc
accacggccggcatggacagcagcatggacgaggaggaggccagtcttgacgctccctgc
atgcagatccagagctctgctgactcggggatcagcctgagtcctatcatgaccagcggc
gagtcagaggtgacccgatcctcgccaacgccctcgaagaccggctcttcgtgccacagc
accccagagaaggaccgagacgccgcccgagtgtccccagaacggacacagcctgcatcc
cagcaagacacgggatctccggagctggaagcggtgctgcagccagcagccatctgtccc
tcggcccagcggagtgcactgacgcgagaggaggagccgagagccggcgagaatgcgctc
actcctgatcagctgctgtctaactgcatgcaccaggacgaagttgtgggattagacccc
ctcgaggagggtaaaaagtgcaataacctggatgacgttgttcactcacaagtaacggaa
acggccaagaatggagagatgatgaaagaaggtttgtttaatgcagaggagatgacacag
gatctcttaaagtggagcgtggcggacgtggtgagctacttcactgctgtggggtttcct
gagcaggctgtggctttcagaacgcaggaaatcgacggaaagtccctcctcctgatgcag
cgcagcgacgtcctgacagggctgtcgatcagactcggccccgccctcaagatatatgag
catcacgtgaaggtgctccagaggagccacttccaggagcacaatgacgttttctcttaa
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