Clarias gariepinus (North African catfish): 128519215
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Entry
128519215 CDS
T10780
Name
(RefSeq) interferon alpha-10-like isoform X1
KO
K05414
interferon alpha
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04060
Cytokine-cytokine receptor interaction
cgar04217
Necroptosis
cgar04620
Toll-like receptor signaling pathway
cgar04621
NOD-like receptor signaling pathway
cgar04622
RIG-I-like receptor signaling pathway
cgar04623
Cytosolic DNA-sensing pathway
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128519215
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128519215
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128519215
04621 NOD-like receptor signaling pathway
128519215
04622 RIG-I-like receptor signaling pathway
128519215
04623 Cytosolic DNA-sensing pathway
128519215
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128519215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128519215
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Interferons
128519215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
SPIN90_LRD
Motif
Other DBs
NCBI-GeneID:
128519215
NCBI-ProteinID:
XP_053348824
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All DBs
Position
3:complement(35476535..35486882)
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AA seq
182 aa
AA seq
DB search
MELLKFVVLFMSAVCVCEGAALPACNLTSFMIQDKNKRCNKLLQNMGGRMPQECLNEKII
SFPKDVFIKAQNEDMLMVALETLKGVNKIFKNEQTSVTWEKNDLSLFTNIVHRQVKSLRD
CVGEEAETDKPADGSAATLRSYFETLEKRLKEREFSLCSWEMVRTELQDGLKKFQTFLES
KK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggagctgttgaagttcgtggtgctgttcatgtccgcagtttgtgtgtgtgaaggtgca
gctctgccagcctgcaatttgacatcctttatgatccaagataaaaacaaaagatgcaat
aaactgcttcagaacatggggggtcggatgccacaggagtgtttaaatgaaaaaatcatc
tcctttccaaaggacgtgttcattaaagctcagaatgaagacatgctcatggtggctcta
gaaactctgaaaggagttaacaaaatcttcaagaacgaacaaacatccgtcacctgggaa
aagaatgacctgagtcttttcacgaatatcgtacacagacaagtgaaaagcctgcgggat
tgcgtaggggaagaggccgagacagacaaacctgcggacggcagcgctgctacactgagg
tcctactttgaaacactggagaagcggctgaaagagagggagttcagcttgtgcagctgg
gagatggtcagaactgaacttcaggatggtctcaaaaagtttcagacttttttagagagc
aagaaataa
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