Clarias gariepinus (North African catfish): 128519277
Help
Entry
128519277 CDS
T10780
Symbol
atp6v1h
Name
(RefSeq) V-type proton ATPase subunit H isoform X1
KO
K02144
V-type H+-transporting ATPase subunit H
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00190
Oxidative phosphorylation
cgar01100
Metabolic pathways
cgar04142
Lysosome
cgar04145
Phagosome
cgar04150
mTOR signaling pathway
Module
cgar_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
128519277 (atp6v1h)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
128519277 (atp6v1h)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128519277 (atp6v1h)
04142 Lysosome
128519277 (atp6v1h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-ATPase_H_N
V-ATPase_H_C
Arm
ARM_ARMC5
Arm_2
DUF2326
HEAT
Adaptin_N
HEAT_2
DUF87
YlbD_coat
Motif
Other DBs
NCBI-GeneID:
128519277
NCBI-ProteinID:
XP_053348928
LinkDB
All DBs
Position
1:38133698..38172628
Genome browser
AA seq
481 aa
AA seq
DB search
MDIRGAVDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISGEDCEFIKKFEVSHSEQKQA
ILTNEGHQCAKTFLNLMAHISKEQTVQYILTLIDDTLQENHQRVNIFFDYAKKTKNTAWS
YFLPMLNRQDLFTVHMAARIIAKLAAWGRDLMEGSDLNYYFNWIKTQLSSQKLHGTGPET
GTGTISPSESSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCITAVLSNKCGFQLQYQMI
FCVWLLAFSPQLCEQLRRYNVVPALSDILQESVKEKVTRIILAAFRNLLEKSAERETRQE
YALAMIQCKVLKQLENLDQQKYDDEDITDDIKFLLERLGESVQDLSSFDEYSSELKSGRL
EWSPVHKSEKFWRENAVRLNEKNYELLKILTTLLEKSDDPQVIAVAAHDVGEYVRHYPRG
KRVIEQLGGKQLVMNHMHHEDQLVRYNALLAVQKLMVHNWEYLGKQLQSTEQTAPAVAAR
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggacatccgaggagcagtagatgccgctgtcccgaccaacatcatcgccgccaaggca
gccgaagtccgagccaacaaagtcaactggcagtcatacttgcagggccagatgatctct
ggagaagactgtgaatttattaagaagtttgaagtttctcattctgagcagaagcaggca
attctgacaaacgaaggacatcagtgcgcaaagacctttcttaacctaatggctcacata
tcaaaggaacagacggttcaatacatcttaaccctgatcgatgacactttgcaggaaaat
catcagcgagtcaacattttcttcgattatgccaagaagacgaaaaacacagcatggtca
tatttcctgcctatgctgaaccgccaggaccttttcaccgttcacatggctgccagaatc
atcgccaagctggcggcctggggccgggatctgatggaagggagtgatctaaactactac
ttcaactggatcaagacacagcttagctcccagaaactgcatggtacaggtccagaaaca
ggaacaggaaccatctctcccagtgaaagctctcagtacgttcagtgcgttgctggttgc
ctgcagttgatgctgagggtgaacgagtataggtttgcctgggtcgaagccgatggagtg
aactgcatcacggcagtactgagtaacaagtgcggcttccagctgcaataccagatgatt
ttctgcgtatggctgctggccttcagccctcagctgtgcgagcagttgcgccgctacaac
gtggttcctgctctctccgacattctgcaggagtctgtcaaagagaaggtcacccgcatc
atcctcgccgctttcaggaacctgctggagaaatctgcagagagggagactcgtcaggag
tacgccttggccatgattcagtgcaaggttctgaaacaactggagaatctggaccagcag
aaatatgatgacgaggacattactgatgacatcaagttccttctggagagactgggagaa
agtgttcaagacctcagctcctttgatgagtacagttctgagctgaagtctggtcgtctt
gagtggagcccagtgcacaagtccgagaagttttggagagagaatgccgttcgtctgaat
gagaaaaactacgaactgctcaagattttgaccaccctcctagagaagtctgatgaccct
caggttattgctgtggctgctcacgatgtaggagagtacgtgagacattaccctcgtggc
aaaagggtgattgaacagctgggtgggaagcagctggtgatgaaccacatgcatcatgag
gaccaactggtgcgctacaatgctctactggctgttcagaagctgatggtgcataactgg
gagtatcttggcaaacagctgcagtccacggagcagactgcaccggctgtcgccgcccgc
agctaa
DBGET
integrated database retrieval system
