Clarias gariepinus (North African catfish): 128519284
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Entry
128519284 CDS
T10780
Symbol
cthrc1a
Name
(RefSeq) collagen triple helix repeat-containing protein 1a
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128519284 (cthrc1a)
Cilium and associated proteins [BR:
cgar03037
]
Other cilia and associated proteins
Stereociliary proteins
128519284 (cthrc1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
128519284
NCBI-ProteinID:
XP_053348933
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All DBs
Position
3:complement(35855639..35860054)
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AA seq
237 aa
AA seq
DB search
MGAVSLFLSLSPLVLCFWLVFPLCETQKAKDRKTVGERDTEFVDKYSVCAQGPPGVQGRD
GNPGVNGIPGTPGIPGRDGLKGEKGECVMERFEESWKPNYKQCAWSALNYGIDLGKIADC
TFTKLRSDSALRVLFSGSLRLKCKTACCSRWYFTFNGAECTGPLPIESIIYLDQGSPEFN
STINMHRTSTVEGLCEGISAGLVDVAIWVGTCSDYPRGDASTGWNSVSRMIIEELPK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgtgtctctgtttctgtctctgtctccgcttgtcctctgcttctggctcgtt
ttcccgctctgtgagactcagaaagctaaagacagaaagactgtgggtgagagggacacc
gaattcgtggacaagtacagcgtgtgtgctcaggggcctcctggagtccaggggcgagat
ggtaatccgggtgtaaacggcattcccgggaccccgggcatccccggccgtgatgggcta
aagggggagaagggcgagtgtgtgatggagagatttgaggagtcgtggaagccgaactac
aagcagtgtgcgtggagcgcgctgaactacggcatcgacctcggcaagatcgctgactgc
acgttcactaagctgcgttcggatagcgccctgcgtgtgctgtttagcggctcgctccgg
ctgaagtgtaagacggcctgctgcagtcgctggtacttcacctttaacggtgccgagtgc
acggggccgttacccatcgagtccattatctacctggaccagggcagtccggagttcaac
tccaccatcaacatgcaccgcacgtccacagtggagggtctgtgtgaaggcatcagcgct
ggtctggtggacgttgcgatttgggtcgggacctgctccgattacccgcgcggagacgcc
tccacgggctggaactccgtatccaggatgatcatcgaagagcttcctaaataa
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