KEGG   Clarias gariepinus (North African catfish): 128519313
Entry
128519313         CDS       T10780                                 
Name
(RefSeq) interferon a3-like isoform X1
  KO
K05414  interferon alpha
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04060  Cytokine-cytokine receptor interaction
cgar04217  Necroptosis
cgar04620  Toll-like receptor signaling pathway
cgar04621  NOD-like receptor signaling pathway
cgar04622  RIG-I-like receptor signaling pathway
cgar04623  Cytosolic DNA-sensing pathway
cgar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    128519313
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    128519313
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    128519313
   04621 NOD-like receptor signaling pathway
    128519313
   04622 RIG-I-like receptor signaling pathway
    128519313
   04623 Cytosolic DNA-sensing pathway
    128519313
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128519313
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cgar04052]
    128519313
Cytokines and neuropeptides [BR:cgar04052]
 Cytokines
  Interferons
   128519313
SSDB
Motif
Pfam: Interferon
Other DBs
NCBI-GeneID: 128519313
NCBI-ProteinID: XP_053348977
LinkDB
Position
3:35470093..35473053
AA seq 190 aa
MDGKHSWTYLYFLLFLIVQERCDACDWMISQFRMKNSFCISELEGMSGEITSMHVPFPHQ
EYYDIEMAKVEDQVRFLTYATDHIIKLLNAVSLKDDIDWDSKKLDNLLNVLDYRQLKELT
KCTATYARRAGHSSSKKKLRRHFRKLKKMLNDSNYSANSLAQIRNVMLQHLRRMDIIAAN
VSQELTKKTN
NT seq 573 nt   +upstreamnt  +downstreamnt
atggacggcaaacactcttggacttatctttatttcctgctgtttttaatcgtgcaggaa
cgatgcgacgcctgcgactggatgatcagccagttccgaatgaagaacagcttctgtatc
tcagagctggagggcatgagtggagagattacttcgatgcatgtaccatttccacaccag
gaatattatgacattgaaatggccaaggttgaagatcaggtcaggtttctgacttatgcc
acggaccatatcatcaagcttcttaatgctgtgtctctaaaagatgacatagactgggac
agcaagaagctggataatttactgaacgtcctcgattaccggcagttaaaagagcttaca
aaatgtactgcgacatatgccagaagagcaggtcactcatccagtaagaaaaaactgaga
agacacttcaggaaattgaagaaaatgctgaatgattctaactacagtgcaaactctttg
gcgcaaatcaggaatgtgatgctgcagcaccttcgcaggatggacatcattgctgccaat
gtgagccaggaactgacaaaaaagaccaactga

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