Clarias gariepinus (North African catfish): 128519383
Help
Entry
128519383 CDS
T10780
Symbol
kcnc1a
Name
(RefSeq) potassium voltage-gated channel subfamily C member 1a isoform X1
KO
K04887
potassium voltage-gated channel Shaw-related subfamily C member 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128519383 (kcnc1a)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
128519383 (kcnc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
BTB_2
Ion_trans_2
BTB_3
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
128519383
NCBI-ProteinID:
XP_053349072
LinkDB
All DBs
Position
3:7642337..7683482
Genome browser
AA seq
602 aa
AA seq
DB search
MVQGDEKDRVVINVGGIRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDAHGDEFFFDRH
PGVFAHILNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEPCCWMTYRQHREAEEALD
SFGGGPADMGSDEVDGDGLGESGDGDDELEMTKRLALGDTTDAKTAGLWQRWQRRVWALF
EDPYSSKYARWVAFASLFFILVSITTFCLETHEAFNPIINRTDVDPQDNNITRVYQETET
EVYLTYIEGVCVVWFTFEFLMRITFCPDKKKFIKNTLNIIDFVAILPFYLEVGLSGLSSK
EAKDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFAT
MIYYAERIGAKPNDPRASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCA
LAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKNKHIPRAPQLGSPNFCKSGTNSPHH
STQSDTCPLAAQDEVLEMNRADPKLNGEAAKAALANEDCPHIDQAISPEDGQIFSPCEPR
GETPCFLLNMTGRATHPGARVRKAGTFSGRAGGEPAGPTLGYPLLQLGWTHSQEDGHARV
TT
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggtccaaggcgacgagaaagaccgagttgtgattaacgtcggggggatccggcaccag
acctatcgcagcaccctgcgcactctgccggggacgcgtttggcctggctcgccgagccc
gacgcccatagccacttcgactacgacgcgcatggagacgagtttttcttcgaccgacac
ccgggcgtcttcgcgcacatccttaactactatcgaacggggaagctgcattgcccagcg
gacgtgtgcggcccgctttatgaagaggagctcgccttctggggcatcgacgagacggac
gtggagccgtgctgctggatgacataccgacaacaccgcgaagccgaggaagccctggac
agtttcggcggcgggcccgccgacatgggcagcgacgaggtggatggagacggtctgggc
gaatccggggacggcgacgacgagctggaaatgaccaagaggctcgcgctcggggacacg
accgatgccaagacggctggactttggcaacgatggcaacgtcgcgtctgggcgctcttc
gaggacccttactcttctaaatatgcaaggtgggtggcgttcgcctctctgttcttcatc
ctggtgtccataaccacattctgcctggagacacacgaggccttcaaccccattatcaac
cgcacggacgttgatccacaggacaacaacatcacacgagtctatcaggagactgagaca
gaggtctatctcacttacatcgagggcgtgtgcgtggtatggtttaccttcgagttcctc
atgcgcattacgttctgtcctgacaaaaagaagttcatcaaaaataccctcaacattatt
gatttcgtggccatcctgcctttttacttagaggtgggtctgagcggcctgtcctccaag
gaggctaaggatgtgctagggtttctgcgagtagtccgatttgtgcgcatcctccgaatc
tttaaactgacacgccattttgtgggtctgcgtgtgcttgggcatacacttcgtgccagc
actaatgagttcctccttcttatcatctttcttgcccttggagtgctcatctttgccacc
atgatctactatgctgagcgtatcggagccaaacctaatgacccccgcgccagtgagcac
acgcacttcaaaaacatccccatcggattttggtgggctgtggtcaccatgactactctg
ggttatggagacatgtatccacaaacatggtcaggcatgctggtgggtgcactgtgtgcc
ctggctggcgtgctcaccattgccatgcctgtcccagtcatcgtcaataactttgggatg
tactactcactggctatggcaaagcaaaaactaccaaagaaaaagaacaagcacatccca
cgtgccccacagctgggctcgccaaatttctgtaagtcaggcacgaactcgccccaccac
agcacacagagtgacacatgcccgctggctgcccaggacgaggttttagaaatgaaccga
gcagatcccaaactgaatggcgaggcggctaaggcagcgctggccaacgaagactgtcca
cacatagaccaggccatttctcccgaggatggacagatttttagcccctgcgaaccacgg
ggggaaactccatgtttccttctaaacatgaccggccgagccacacaccctggcgccaga
gtgagaaaagctggaacattctcagggagggcagggggggagccggctggtcctacgcta
ggctacccgctgttgcagctagggtggacacacagccaggaggatggccatgccagagtc
accacctga
DBGET
integrated database retrieval system
