Clarias gariepinus (North African catfish): 128519386
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Entry
128519386 CDS
T10780
Name
(RefSeq) deleted in malignant brain tumors 1 protein-like
KO
K06456
T-cell surface glycoprotein CD6
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128519386
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cgar04090
]
128519386
CD molecules [BR:
cgar04090
]
Proteins
128519386
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRCR
SRCR_2
DUF8622
Hepsin-SRCR
SCIMP
Motif
Other DBs
NCBI-GeneID:
128519386
NCBI-ProteinID:
XP_053349076
LinkDB
All DBs
Position
3
Genome browser
AA seq
709 aa
AA seq
DB search
MEMEVFKILVLLQALVLCQAKLYINQASTPCSWAITSAEENQSLDVAIFTKQSLLPLATR
ICQGLGCGKVYKLNENTAHGNASCLTGCSYHNNQLINCSKVHSIDCSILSGAVCDAPYII
PANNHCVWKITSPAPESAVILTPESLLRLSNEICQNFNCGEAFPQNNTKAPDNSSCLTDC
IYHNSYLRNCSTVVRNDCTNMSEVICGKHEVRLSGGSHKCAGRVELWNAGQWGTVCDDEW
DKQDADVVCAQLNCGYAISVNGQDGPYTQGKGRILMDELNCTGKERSLWECPAVREGHDC
GHKEDAGVVCSEYKALRLTGGLDRCSGRVEIHRNGSWGTVCNECWDKQEASMACSMLGCG
TAKKFEAFETHFTHTNGSLWYYFCKGGHKTLWECLEIETSKVSHLQQTCRNSMAAGVICN
NSLGLPVPTTPVVSTTTVTTMQPNPDALTMIWTPELLGCIILSCILLIAILSNIIMCCCS
KKKRKALEVQQRFASLQTNAAAEENNYRDSIHLVKVTNNDTDAAPPIPPQIWTQSSVEST
SYDTDYEANDSAPSGDFTLSTFRNSMRHNADGRPPAVKGPHLQMVTEEDTSAGVQGYLQA
PFDTFQRLSATPSADSFDTSSTSSGEVYENTGHNTADLYMENYEHPGEIISDLPLGVSGE
SINPSGGEDSPIYSPVSADVDFISHDTDDHGESDDYDDVVGYPQTPLMY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaggtttttaagattcttgtactgcttcaggctcttgttctctgtcaagct
aaactgtacataaaccaggcctccacaccgtgctcctgggctataacctctgcagaagaa
aatcagagtttggatgtggctattttcactaagcaatcccttttaccacttgctactcgg
atctgtcagggcctcggctgtggtaaagtctacaagctaaatgagaacactgcacatgga
aatgcgagctgtctcacaggctgcagctaccacaacaaccagctgatcaactgctcaaag
gttcatagcatcgactgcagcattctctctggggctgtttgtgatgctccctacataatc
ccagcaaataaccattgtgtctggaaaataacatctccagcacctgaatccgcagtcatt
ttaaccccagagtccctgctcagactgtccaatgaaatatgtcagaacttcaactgtgga
gaagcgtttccacagaataacacaaaagcaccagacaacagttcctgtctcactgattgc
atctatcacaactcctatttaaggaactgttccactgtggtcagaaatgactgcacaaat
atgtctgaagtcatctgtggtaaacacgaagtcagattgtctggaggtagccataaatgt
gctggacgggtggagctgtggaacgctggacagtggggaacagtgtgtgatgatgagtgg
gataagcaggatgcagatgtggtctgtgctcagctgaactgtggatatgcaatctctgtt
aatgggcaggacggcccctatacacagggtaaaggtcgtattctcatggatgagctgaac
tgcacagggaaggagaggagcctgtgggagtgtcctgcagtcagggaaggtcatgactgt
ggacataaggaagatgctggagtggtgtgttcagaatataaggctctgagactcactggt
ggactggaccgttgctcaggcagagtggaaatccatcggaacggttcatggggtacagtg
tgtaatgaatgctgggataagcaagaggcatccatggcttgttccatgttgggctgtggg
acagcaaaaaaatttgaagcctttgagacacattttacccacacaaatggatcactgtgg
tattacttttgtaagggtggccataaaaccctttgggagtgtctggagatagaaacaagt
aaagtctcacatttacaacagacctgcagaaactcaatggctgcaggagtgatttgtaat
aactctcttggcctgcctgtaccaaccactccagttgtaagtacgacaacagtaacaaca
atgcaacccaacccagatgctctcacaatgatttggactcctgaattactgggctgcatc
atactatcctgcattcttttaattgcaattctctcgaatataatcatgtgttgctgttca
aaaaagaaaagaaaagctcttgaggttcagcagagatttgccagtttacaaaccaatgct
gcagctgaagagaacaactatagagattcaatccaccttgttaaagtcaccaacaatgac
acggatgccgctccacccatcccaccacaaatatggactcagagtagtgtagaaagtact
tcctatgatacagactacgaagccaatgacagcgctccaagtggtgatttcaccctgtcc
accttccgcaactctatgcggcataatgcagatggtcgacctcctgctgtgaagggccca
catctgcagatggttactgaagaggacacaagtgctggagtgcaaggatacctacaagcc
cccttcgatacatttcagcgtctctctgcaacacctagtgcggactcatttgacacatcc
agcacctcatctggggaggtttatgaaaatacaggtcacaacacagcagatctgtacatg
gagaattatgaacatcctggagaaatcataagtgacctgccacttggagtgtctggagag
agtatcaacccgagtggtggagaagattcccctatttactctcctgtatccgctgatgta
gatttcatctcacatgacactgatgaccatggcgaaagtgatgactatgatgatgttgtt
ggttacccacagacaccactgatgtattga
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