Clarias gariepinus (North African catfish): 128519458
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Entry
128519458 CDS
T10780
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03320
PPAR signaling pathway
cgar04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128519458 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
128519458 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgar01004
]
128519458 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128519458 (slc27a1a)
Lipid biosynthesis proteins [BR:
cgar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128519458 (slc27a1a)
Transporters [BR:
cgar02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
128519458 (slc27a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Phage_int_M
Motif
Other DBs
NCBI-GeneID:
128519458
NCBI-ProteinID:
XP_053349167
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All DBs
Position
3:complement(33381748..33402183)
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AA seq
643 aa
AA seq
DB search
MRYVVSLGSLGLLRLLGAPWSWSVAAGLGLYLGSGGWRYLYVAARTVRRDIHGVLVLLRV
KLALWRHMRNGSNIPSIFAQTVAQHPDKPALVYEATGETWTFTELDQLCNAVAQWALSQG
WASGDVVALLMESRPLQVVLWLGLAKIGIESALINFNLRRDSLMHCLSVSGARALVFGAE
LADAVSEVRSNLSDSMALFCTGDLTPDRLTCLKAQLLDSLLASAPRHPPSITSAKGFSDR
LFYIYTSGTTGLPKAAIVVHSRYYRMAAFGYYAFGMKPDDILYDCLPLYHSAGNIIGVGQ
CLIHGLTVVVKKKFSASRFWEDCIKYNCTVVQYIGEICRYLLSQPVRPSERGHRVRLAVG
NGLRPSVWEAFTQRFGIKQIGEFYGATECNCSIANMDGKVGSCGFNSMILPNVYPIRLVK
VNEETMELVRNKHGLCVPCQPGEPGLLVGKINQKDPLRRFDGYANQEATKKKIVHDVFKK
NDSAYLSGDVLVMDELGYMYFRDRSGDTFRWKGENVSTTEVEGTLSNLLGQTDVAVYGVA
VPGVEGKAGMAAIADSAGSFNCESFLREVQKVLPPYARPVFLRISPQVDTTGTFKIQKTR
LQKEGFDPRITADRIYFLNSRAGRYEGVTEEMYNALVEGRIAL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatgtcgtatctctcggctctctcggcctgctccggctgctcggcgcgccctgg
tcgtggagcgtggccgcgggactcggcctgtacctgggctcgggcggctggagatacctg
tacgtggccgcacgcaccgtcaggagggatatccatggtgtgctggtgctcctgagggtg
aagctggcgctgtggcgtcatatgcggaatggcagcaacatcccctccatctttgcccag
accgtggctcagcacccggacaaaccggccctggtgtacgaggccaccggggaaacatgg
accttcactgagctggaccagctgtgtaacgccgtggctcagtgggctctgagtcagggc
tgggcctccggagacgtggtggctctgttgatggagagcaggcccctgcaggtggtgctt
tggcttggtttggccaaaatcggcatcgagtcggcgctcatcaactttaacctgaggcga
gactcccttatgcactgcctgagtgtgtcgggagcacgggcactcgttttcggggcagag
ctcgctgatgccgtgtcggaggtgaggtccaatctcagcgactccatggcgctcttctgc
accggagacctgactcctgatcgcttgacctgtctcaaagctcagctgctcgattcgctg
ctggcgtctgcgccgcgtcatcctccctccatcacctctgccaagggcttcagcgaccgt
ttgttctacatttatacctctggcaccaccggacttcccaaagctgctatcgtggtgcac
agtcgatattatagaatggctgctttcgggtattacgctttcggcatgaagccggacgac
atcctgtatgactgcttacctctctaccattcagcgggtaatataattggtgtcggtcag
tgtttaatccacggcctgaccgtggtggtgaagaagaagttttccgccagccgcttttgg
gaagactgcatcaaatacaactgtactgtggtgcagtacatcggtgagatctgccgctac
ctgctgtctcagcctgtgcgcccatcagagcgtgggcaccgcgtgcgcctggctgtgggt
aacgggctccgccccagtgtgtgggaggccttcactcagcgcttcggcattaaacagatc
ggcgagttctacggagctaccgagtgtaactgcagcatcgccaacatggacggcaaggtg
ggctcgtgtggctttaacagcatgattctgccgaacgtctaccccatccgtctagtgaag
gtgaacgaggagaccatggagctggtgaggaataaacacggactttgtgttccatgtcag
ccaggagaacccgggctgctggtgggcaaaataaaccagaaggaccctctccgccgcttt
gacggctacgccaaccaggaggccaccaagaagaagattgtccatgatgtttttaagaaa
aatgactctgcctacctgtcaggtgatgttctggtgatggatgaactcggctacatgtac
ttccgggaccgcagcggggacacttttcgctggaagggtgaaaacgtctccactactgaa
gtggaaggaactctgagcaacctgctgggccagacggatgtggcagtgtacggagtggcc
gtgccaggagtggaagggaaagcgggaatggctgctatcgctgactccgcagggagcttt
aactgtgaatcgtttctcagagaagtccagaaggtgttgcctccgtacgctcggccagtt
ttcctccgcatctctccacaagtcgacactacaggtacatttaaaattcagaagaccagg
ttacagaaggagggatttgacccccgtatcacagcagaccgcatctactttctgaactcc
agagcaggacgctatgaaggggtgactgaggaaatgtataatgccttagtggaaggtaga
atagctctgtaa
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