Clarias gariepinus (North African catfish): 128519466
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Entry
128519466 CDS
T10780
Name
(RefSeq) tubulin alpha chain-like isoform X1
KO
K07374
tubulin alpha
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04145
Phagosome
cgar04210
Apoptosis
cgar04530
Tight junction
cgar04540
Gap junction
cgar04814
Motor proteins
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128519466
09143 Cell growth and death
04210 Apoptosis
128519466
09144 Cellular community - eukaryotes
04530 Tight junction
128519466
04540 Gap junction
128519466
09142 Cell motility
04814 Motor proteins
128519466
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128519466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128519466
03036 Chromosome and associated proteins [BR:
cgar03036
]
128519466
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128519466
04147 Exosome [BR:
cgar04147
]
128519466
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128519466
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
128519466
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
128519466
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128519466
Exosomal proteins of other body fluids (saliva and urine)
128519466
Exosomal proteins of colorectal cancer cells
128519466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
128519466
NCBI-ProteinID:
XP_053349174
LinkDB
All DBs
Position
3:complement(30808041..30810040)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISVHIGQAGVQMGNSCWELYCLEHGIQPDGRITSGNTTLADSSFGTFFSETGAGKY
VPRAVFIDLEPTVVDEIRNGQYRQLYHPEQLISGKEDAANNYARGHYTIGKEIVDSVLDR
MRKMADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTAV
VEPYNSILTTHTTLEHSDCSFMVDNEAIFDICKRNLDIERPSYSNLNRLIAQIVSSITAS
LRFDGALNVDLTEFQTNLVPYPRIHFPLVTYSPIISAEKAYHEQLSVAEISNACFEPANQ
MVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASIKTRRSIQFVDWCPTGFKVGINYQPPT
VVPGGDLAKVQRAVCMLSNTTAIAEAWSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA
REDMAALEKDYEEVGADSAEDCEEDVDEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtgtatctcggtgcacattggtcaagcaggagtccagatggggaattcctgc
tgggagttgtattgcctggagcatggcatccagcctgatgggaggatcacttctggcaac
actactttggcagattcttcttttggtactttcttcagtgaaactggagctggaaaatat
gttccacgagctgttttcattgacctggaaccaacagttgtagatgagatcaggaatgga
caatatcgtcaactttaccacccagagcagctaataagtggcaaagaagatgcagctaac
aactatgcccgtggccattacactatcggcaaggagatagtagactctgtccttgatcgc
atgcgaaaaatggctgaccagtgtacaggtctgcaaggattcttgatcttccacagcttt
ggtggtgggactggatctggttttacctccctgttgatggagcgcctatctgttgactat
ggcaaaaaatcaaagctggagttctcggtgtaccctgctccccaggtttccactgcagta
gtcgagccctacaactccatcttaaccactcacaccacgcttgagcactcggactgctcc
ttcatggtggataatgaggccatcttcgacatctgcaaacgcaatctggacatagaacgc
ccatcctacagcaacctgaacagactaatcgcgcagatcgtttcttccatcactgcttct
ttacgatttgatggtgctctcaatgtggatctaactgagttccagaccaatttggttccg
taccctcgtatccatttcccactggttacctactcccctattatatctgctgaaaaggcg
taccatgagcagctgtccgtggcggagatctcaaatgcttgctttgaaccagccaaccag
atggtgaaatgtgaccctcgccgtggcaaatacatggcctgttgcttgctctatcgtggt
gatgtggtgcctaaagatgtcaatgctgctattgccagcataaagacccgtcgctctatc
cagtttgtggactggtgtcccaccggcttcaaggtgggtattaactaccagcctcccact
gtagtacctggtggagatctggccaaggtccaaagggctgtatgcatgctgagtaacaca
actgcaattgcagaagcctggagtcgcttggatcacaagtttgacctgatgtatgccaag
cgggcatttgtgcactggtacgttggtgagggaatggaagaaggggagttctctgaagcc
agagaggacatggctgccttggaaaaggattatgaggaggttggagcagattctgctgag
gactgtgaggaagatgtagatgaagagtactag
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