KEGG   Clarias gariepinus (North African catfish): 128519467
Entry
128519467         CDS       T10780                                 
Name
(RefSeq) WD repeat-containing protein 88-like
  KO
K24757  WD repeat-containing protein 88
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cgar04990]
    128519467
Domain-containing proteins not elsewhere classified [BR:cgar04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   128519467
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_ACSF4 Beta-prop_EML Beta-prop_WDR75_1st WD_LRWD1 Beta-prop_Aladin Beta-prop_NWD2_C WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_WDR75_2nd Tricorn_2nd Beta-prop_RIG_2nd Beta-prop_DCAF12 PQQ_2 Cytochrom_D1 zf-dskA_traR Beta-prop_Vps41 WD40_RFWD3 Ge1_WD40 Avr2
Other DBs
NCBI-GeneID: 128519467
NCBI-ProteinID: XP_053349176
LinkDB
Position
3:complement(2914107..2922535)
AA seq 400 aa
MSQALLDPLTLDQVINEEEEEEDADTNSLWEHEALAQIPVKVLRGHTESATSCHFCFHDT
RLLTSSHDKTAIFWDVETGSQLMVLKGGHTGAITACCLVPEKNRVITSSWDKTVNAWDLE
TGKILWTVVQGGLLMSCSVSGDGKYVASASDLENTLYVNCAATGQSVHYIPGHHTSTIMS
CRFDAQSQHVASVSADRSIKLWDLCSHKTTLSINSAHRNVISSCCFTQNGRYLCTASWDR
ALLLWDVQTGSFRTKGGERLCQLHDGIVSSCAFSSDASVLVSGAYDRTVALWDVKGLYRT
LVLKGHLDWVTDVDISADKNWVASSSKDCTVRLWNIEQHENIPAVRESRRAHGYEPHIIQ
CEECGKAFSLSRLEKVHFITTCVFCRLKTTHRSPPAPPPL
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgtctcaggccctgctggacccactgaccctggatcaggtgattaatgaggaggaggag
gaggaagacgcagacactaactcactgtgggaacacgaggcgctcgcgcagattcctgta
aaggtgttgaggggacacactgaatctgccaccagctgccacttctgttttcatgacaca
cgacttctcaccagctcccacgacaagacggcaatattctgggatgtggagacaggatca
cagttgatggtgctaaaaggaggacacacaggggccatcactgcatgctgtttagtccca
gagaagaacagagtaataacatcctcttgggataagactgtaaatgcctgggatctggag
accggcaaaatcctgtggacagtagtgcagggagggttgctgatgtcctgcagtgtatca
ggggatgggaagtatgtggcgtcagcctcagacttggagaacactctgtacgtcaactgt
gcagcaacaggacagagtgtgcattatattccaggtcatcatacatccacaataatgagc
tgcaggtttgatgctcagagtcagcacgtggccagcgtctcagcggacaggtccatcaaa
ttatgggacctctgttctcacaaaaccaccctgagcattaacagtgcgcacaggaatgtc
atctccagctgctgctttacacaaaatggacgttacttgtgcactgcatcatgggatcgt
gctctactgctgtgggatgtgcaaacaggttcattccgtaccaaaggaggagagcggctt
tgtcaattgcatgatggaattgtcagctcctgtgccttctccagtgatgcctctgtactt
gtgtctggagcttacgacaggacggttgcattgtgggatgtaaagggattgtacagaact
ctggtgctgaagggtcacctggactgggtgacagatgtggacatcagtgctgataagaac
tgggtggcttcttcctccaaggattgtacagtgcgtctgtggaacattgagcagcatgag
aacattcctgcagtcagagagagcaggagagcacatggctatgagcctcatatcattcag
tgtgaggaatgtggaaaggcgttttcgctgtctcgcttggagaaagttcacttcatcacc
acgtgtgtgttctgtcgcctgaagactacacacagatctccaccagcgcctccgcctctg
tag

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