Clarias gariepinus (North African catfish): 128519487
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Entry
128519487 CDS
T10780
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
cgar04517
IgSF CAM signaling
cgar04530
Tight junction
cgar04810
Regulation of actin cytoskeleton
cgar05100
Bacterial invasion of epithelial cells
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128519487 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128519487 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
128519487 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128519487 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128519487 (arpc1a)
05100 Bacterial invasion of epithelial cells
128519487 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128519487 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128519487 (arpc1a)
Membrane trafficking [BR:
cgar04131
]
Others
Actin-binding proteins
Arp2/3 complex
128519487 (arpc1a)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
128519487 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
RMC1_N
Beta-prop_HPS5
Rax2
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
128519487
NCBI-ProteinID:
XP_053349201
LinkDB
All DBs
Position
3:complement(20313026..20320718)
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKAHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGMWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
APTPWGSKMPFGQVMAEFGGAGSGGWVHSVCFSATGNRLAWVSHDSTVTVVDPTKSSTPS
QLKTEFLALLSVTFVSENNIVAAGHDCCPMLFSFDDGGNLTFISKLDIPKQSIQRNISAM
ERFRNMDKRATTEDRNSTLETLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccaccagtttctcttggagcccatcacatgccatgcgtggaacagggacagg
actcaaattgctattagtccgaacaaccatgaggtccatatatacaagaagagtggaaat
caatgggtaaaagcccatgaactaaaggaacacaatgggcacattacaggaattgactgg
gctcctaaaagcgatcggattgtaacctgcggagcggatcgcaacgcttacgtgtggagc
cagaaggacggcatgtggaagcccactctcgtcatcctcaggatcaaccgtgccgctacg
ttcgtgaagtggtctccactggagaacaagttcgccgtgggcagcggagctcgcctcata
tctgtttgctacttcgagtctgaaaatgattggtgggtgagcaaacatatcaaaaagcct
attcgctccactgtcctcagtctagactggcatccaaacaacgtactcctggcagctggg
tcatgtgacttcaaatgcagggtgttctctgcatacatcaaggaggtggaagagaagcca
gctccaactccatggggatccaagatgccatttggtcaagtgatggcagagtttggtgga
gcaggcagtggaggatgggtccacagcgtctgtttctctgccactggaaatcgactggcc
tgggtcagccatgacagcactgtgaccgtggtggatcccacaaaaagctcaacgccaagc
cagttgaagactgagttccttgctcttctgagtgtgacctttgtgtctgagaataacatt
gtggcagcgggtcatgattgctgcccgatgctgttcagtttcgatgacggtggaaacttg
accttcatatccaagttggacattccaaagcagagcatccagcgcaatatctctgccatg
gagcgtttccgcaatatggataagagagccactaccgaagaccgcaatagcactctggag
acccttcaccagaacagcatcacccaagtgtctatatatgaaggagacaaaagagattgt
cgcaaattctgcactacaggaatcgacggagcgatgaccatatgggactttaagacttta
gagtcgtctatccaaggcctgcggatcatgtaa
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