KEGG   Clarias gariepinus (North African catfish): 128519527
Entry
128519527         CDS       T10780                                 
Symbol
sf3b4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128519527 (sf3b4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgar03041]
    128519527 (sf3b4)
Spliceosome [BR:cgar03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    128519527 (sf3b4)
 Complex B
    128519527 (sf3b4)
 Complex C
   U2 SnRNP specific factors
    128519527 (sf3b4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 128519527
NCBI-ProteinID: XP_053349261
LinkDB
Position
3:36571531..36574744
AA seq 399 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPTAPTPVMTALGAAMSIPGLPPP
GAFPPVPPPGALPPGMPPGMPMPPAPGTPAPQGASGVPPPGPPPFPPAGMHPPGMPPMPM
PPSGPPGMVPPPPGSSQHRAPPPPSMPPPPQMGMPPRGPFGPHMGPPMPPGMRGPPPPMP
PPGYAAGPPRPPPFGFQRPPMPPRPPAPPQAPLRAPLPP
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggcggcgggaccgatatcagaaagaaatcaagatgcgacggtgtatgttggtggtttg
gatgagaaagtgtccgaaccgttgctatgggaactcttccttcaggctggaccggtagtg
aacacacacatgcccaaagacagagtgacgggacaacatcagggttacggttttgtagag
ttcctcagtgaagaggatgctgattacgctataaaaatcatgaacatgataaagttgtac
ggtaaacccatccgcgtgaacaaagcctcggctcacaacaagaacctggacgtgggcgcg
aacatcttcatcggtaacctggatccggagatcgacgagaagctcctgtacgacaccttc
agcgccttcggagtcatcctgcagacccccaagatcatgagggaccccgacacaggcaac
tccaagggctacgctttcatcaacttcgccagcttcgacgcgtctgacgcggccatcgag
gcgatgaacgggcagtacctgtgtaaccgccccatcaccgtgtcctatgccttcaagaag
gactccaagggtgagaggcacggctcagccgctgagaggctcctggccgcgcagaacccg
ctttcacaggccgaccggccacatcagttgttcgccgacgctccaccgcctcccacagcc
cccacgccagtcatgaccgcgctgggagcggccatgtccatacccggcttgcctcctcct
ggtgccttcccccctgtacctccacctggcgctctgccacctggaatgccccccgggatg
cccatgccccccgcgccaggcactcctgcccctcagggtgcctctggagtgcctcctcct
ggacctccaccgttccctccagcaggcatgcacccaccaggaatgccaccgatgccaatg
cctccatctggacctcctggaatggtgcctcctcctccaggatcctcccagcacagagcc
ccacctccccctagcatgcccccacccccacagatgggcatgcccccccggggaccgttt
ggccctcatatgggtcctccgatgccccctggaatgagaggcccgcctcccccgatgcca
cccccaggttacgccgcaggcccccctcgccctcctccgtttggttttcagagaccgcca
atgccccctcgtccccctgcgccaccccaggcccctttaagggcacccctgcccccctaa

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