Clarias gariepinus (North African catfish): 128519549
Help
Entry
128519549 CDS
T10780
Symbol
cdh31
Name
(RefSeq) B-cadherin isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04371
Apelin signaling pathway
cgar04514
Cell adhesion molecules
cgar04520
Adherens junction
cgar05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
128519549 (cdh31)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128519549 (cdh31)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128519549 (cdh31)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128519549 (cdh31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128519549 (cdh31)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128519549 (cdh31)
04090 CD molecules [BR:
cgar04090
]
128519549 (cdh31)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
128519549 (cdh31)
Cell adhesion molecules [BR:
cgar04515
]
Cadherins
Major cadherins
128519549 (cdh31)
CD molecules [BR:
cgar04090
]
Proteins
128519549 (cdh31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Fibulin_C
DUF4861
DUF6598
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
128519549
NCBI-ProteinID:
XP_053349290
LinkDB
All DBs
Position
3:complement(13903133..13957268)
Genome browser
AA seq
879 aa
AA seq
DB search
MELKWGTRLGVLFVLLQVVWSAESTPCSPGFASDLFFFRVHRQHLHRGTRIGTVVFSDCS
ERTRTIFDSDDNRFHIATDGTVKLKRSVTLHNGHKMFSVHAWDSNGKKHTAFVKVEHQGR
VNHQHHQHEDAVAIENESPLTLEFPKPGGLRRRKRDWVIPPISLSENDSKGPYPKQVVQI
KSSYAKETTMAYSISGEGADLPPAGIFTVAKNTGWLMVSRPLDREAKARYVLLVHAYSPT
DPNIKEDPMEVIVQVLDQNDNSPIFTQNPFLGSVPEASLMGFEFMTVNATDKDDPDTDNA
DVAYSIISQTPPEPKPNMFAINPVSGAIRVNADGLDRETWPEYTLEIQAGDQKGEGRITK
GKAIITVTDSNDSPPKFVQSSYTVSVPENKVDYTVVKMSVTDDDEPQSPAWAAKFKIVSG
NTGGVFSVSTGPNKQEGIITTVKPLDYETNRKYTLLVAVENEVPFAKPLPTSTATVIVNV
DDVNEAPVFNPPEKSISVSEDAAVGNDLTTYTATDPDTARSQKLTYRVGSDPAGWLNIDK
DTGLIKVRSPLDRESPFVKNHKYTSLILAVDDDALPATGTGTLLIELTDVNDNAPTIEER
EIAVCNKESTPVTLSVTDKDGPGFGAPFSVVLQGDSKNNWTAKMNDSKTGIVLSLKTPLE
PGSYSVIMRVFDTGDQSQDNILRATVCDCTGDDVKCSERAVAGFGLPAVLGILGAILALL
LLVLLLLLFLRRKGSKKEQPLINDDDIRDNVYYYDEEGGGEDDQDYDLSVLHRGLDNRPD
VFRNDVAPTFMPAPQYRPRPANPDEIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGSE
AGSLSSLNSCSSGDQDYDCLGEWGPRFKKLADMYGGGED
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaaatggggcacgcgtttgggagtgctgtttgttttactgcaggtcgtgtgg
agtgcggagtcgacgccatgttctcctggctttgcttctgatcttttcttcttcagagtt
cacagacaacacctgcacaggggcacgagaatcggcacagttgttttcagcgactgcagt
gaaaggacaaggactatcttcgactccgatgataatcggtttcatatagctactgatggc
acggtgaagctgaagagatcagtcactcttcataatggccataagatgttctctgtccat
gcctgggactccaatggaaagaaacacactgcatttgtgaaagtggaacatcagggtcga
gtcaaccaccaacaccaccagcatgaagatgctgtggcaattgagaatgaatcccccttg
actttggagtttcctaaaccaggtgggttgcgaaggagaaaaagagactgggtgattcct
ccaatctccttgagtgagaatgactctaaaggcccttatcccaaacaggttgtccagatt
aagtccagttatgccaaagaaacaacaatggcgtacagcatcagtggtgaaggagcagac
ctgcctccagcaggaattttcacagtagcaaaaaacactggatggcttatggtgtcaagg
cctctagacagggaagcaaaagcaagatatgtgctgctagtccatgcttattcacctact
gatcccaacattaaagaagatcccatggaggttatagtccaagtgctggatcagaacgat
aacagtcctatcttcacccaaaatccattccttggcagtgtaccggaggcttcactaatg
ggatttgagttcatgactgtcaatgccactgacaaagatgatccagacactgacaatgct
gatgtcgcatactcaatcatcagtcagactccaccagagccaaaaccaaacatgtttgcc
atcaaccctgtcagtggagcaattcgagtgaatgctgatggactggacagggagacctgg
cctgaatacaccttggaaattcaagcgggagatcagaagggagaaggtcgaataactaaa
ggaaaagcaattattactgtaactgatagcaatgacagccctcctaaatttgtgcaatcc
tcgtatactgtgagtgtcccagagaataaagtggactatacagtggtgaagatgtcagtg
actgatgatgatgaaccacagtctcctgcctgggcagcaaaattcaagattgttagtggt
aacactggtggggttttcagtgttagcacaggaccaaacaaacaggagggcatcattact
actgtcaagccattggactatgaaaccaacaggaaatacacattgctggtagctgtggaa
aatgaggttccgtttgctaaacctttgcctacctccactgccactgtcattgtaaatgtt
gacgatgtgaatgaggctccagtattcaatccaccagagaagtccatttctgtatctgaa
gatgcagcagttggtaatgacctgacgacctacacagccactgatccagacactgcgagg
tcccagaaactgacgtatcgtgtaggtagtgatcctgccggctggctaaatattgacaaa
gacactggacttatcaaagtcagaagtccactggaccgagaatctccttttgtgaaaaat
cacaaatacacatccctaattctagctgtggacgatgatgctttgccagcaactggtact
ggtaccctattaattgagttaacggacgtaaatgataacgccccaacaattgaagaaagg
gaaatcgcagtatgtaataaggagtcaactccagtgaccctgtctgtgaccgataaggac
gggcctggttttggtgctccgtttagtgtggtgctgcaaggagatagcaagaacaactgg
actgccaagatgaacgattcaaaaacggggattgtactttcacttaagaccccacttgag
ccaggaagttacagcgttattatgagggtatttgacactggtgaccaatcacaagacaat
attctcagggccactgtatgcgactgcacaggagatgacgttaaatgctcggaaagggca
gtcgcaggattcggtctccccgcagtgctcggaattttgggggctattttggccctgttg
ttgctggtcctgctcctgcttctgttccttagaagaaaaggctcaaagaaggagcagccc
ctgatcaatgatgatgatatccgtgacaatgtttactattatgatgaggagggtggtgga
gaggatgatcaggactatgacctgagcgttctacacaggggccttgacaaccgtcctgac
gttttccgtaatgatgtggctcccacctttatgcctgctccacaatatcggccacggcct
gcgaacccagatgagattggcaacttcattgatgataacctgaaggctgctgataatgac
cccacagctcccccctacgactctctgctggtgtttgattatgagggtggtggatcagag
gcaggctctctcagctccctgaactcctgcagctctggagatcaggactacgactgtctc
ggtgaatggggtccgcgctttaagaaactagctgacatgtacggaggcggagaggactaa
DBGET
integrated database retrieval system
