Clarias gariepinus (North African catfish): 128519549
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Entry
128519549 CDS
T10780
Symbol
cdh31
Name
(RefSeq) B-cadherin isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04371
Apelin signaling pathway
cgar04514
Cell adhesion molecule (CAM) interaction
cgar04517
IgSF CAM signaling
cgar04518
Integrin signaling
cgar04519
Cadherin signaling
cgar04520
Adherens junction
cgar05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
128519549 (cdh31)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128519549 (cdh31)
04517 IgSF CAM signaling
128519549 (cdh31)
04518 Integrin signaling
128519549 (cdh31)
04519 Cadherin signaling
128519549 (cdh31)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128519549 (cdh31)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128519549 (cdh31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128519549 (cdh31)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128519549 (cdh31)
04090 CD molecules [BR:
cgar04090
]
128519549 (cdh31)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
128519549 (cdh31)
Cell adhesion molecules [BR:
cgar04515
]
Cadherins
Major cadherins
128519549 (cdh31)
CD molecules [BR:
cgar04090
]
Proteins
128519549 (cdh31)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
DUF6598
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
128519549
NCBI-ProteinID:
XP_053349290
LinkDB
All DBs
Position
3:complement(13903133..13957268)
Genome browser
AA seq
879 aa
AA seq
DB search
MELKWGTRLGVLFVLLQVVWSAESTPCSPGFASDLFFFRVHRQHLHRGTRIGTVVFSDCS
ERTRTIFDSDDNRFHIATDGTVKLKRSVTLHNGHKMFSVHAWDSNGKKHTAFVKVEHQGR
VNHQHHQHEDAVAIENESPLTLEFPKPGGLRRRKRDWVIPPISLSENDSKGPYPKQVVQI
KSSYAKETTMAYSISGEGADLPPAGIFTVAKNTGWLMVSRPLDREAKARYVLLVHAYSPT
DPNIKEDPMEVIVQVLDQNDNSPIFTQNPFLGSVPEASLMGFEFMTVNATDKDDPDTDNA
DVAYSIISQTPPEPKPNMFAINPVSGAIRVNADGLDRETWPEYTLEIQAGDQKGEGRITK
GKAIITVTDSNDSPPKFVQSSYTVSVPENKVDYTVVKMSVTDDDEPQSPAWAAKFKIVSG
NTGGVFSVSTGPNKQEGIITTVKPLDYETNRKYTLLVAVENEVPFAKPLPTSTATVIVNV
DDVNEAPVFNPPEKSISVSEDAAVGNDLTTYTATDPDTARSQKLTYRVGSDPAGWLNIDK
DTGLIKVRSPLDRESPFVKNHKYTSLILAVDDDALPATGTGTLLIELTDVNDNAPTIEER
EIAVCNKESTPVTLSVTDKDGPGFGAPFSVVLQGDSKNNWTAKMNDSKTGIVLSLKTPLE
PGSYSVIMRVFDTGDQSQDNILRATVCDCTGDDVKCSERAVAGFGLPAVLGILGAILALL
LLVLLLLLFLRRKGSKKEQPLINDDDIRDNVYYYDEEGGGEDDQDYDLSVLHRGLDNRPD
VFRNDVAPTFMPAPQYRPRPANPDEIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGSE
AGSLSSLNSCSSGDQDYDCLGEWGPRFKKLADMYGGGED
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaaatggggcacgcgtttgggagtgctgtttgttttactgcaggtcgtgtgg
agtgcggagtcgacgccatgttctcctggctttgcttctgatcttttcttcttcagagtt
cacagacaacacctgcacaggggcacgagaatcggcacagttgttttcagcgactgcagt
gaaaggacaaggactatcttcgactccgatgataatcggtttcatatagctactgatggc
acggtgaagctgaagagatcagtcactcttcataatggccataagatgttctctgtccat
gcctgggactccaatggaaagaaacacactgcatttgtgaaagtggaacatcagggtcga
gtcaaccaccaacaccaccagcatgaagatgctgtggcaattgagaatgaatcccccttg
actttggagtttcctaaaccaggtgggttgcgaaggagaaaaagagactgggtgattcct
ccaatctccttgagtgagaatgactctaaaggcccttatcccaaacaggttgtccagatt
aagtccagttatgccaaagaaacaacaatggcgtacagcatcagtggtgaaggagcagac
ctgcctccagcaggaattttcacagtagcaaaaaacactggatggcttatggtgtcaagg
cctctagacagggaagcaaaagcaagatatgtgctgctagtccatgcttattcacctact
gatcccaacattaaagaagatcccatggaggttatagtccaagtgctggatcagaacgat
aacagtcctatcttcacccaaaatccattccttggcagtgtaccggaggcttcactaatg
ggatttgagttcatgactgtcaatgccactgacaaagatgatccagacactgacaatgct
gatgtcgcatactcaatcatcagtcagactccaccagagccaaaaccaaacatgtttgcc
atcaaccctgtcagtggagcaattcgagtgaatgctgatggactggacagggagacctgg
cctgaatacaccttggaaattcaagcgggagatcagaagggagaaggtcgaataactaaa
ggaaaagcaattattactgtaactgatagcaatgacagccctcctaaatttgtgcaatcc
tcgtatactgtgagtgtcccagagaataaagtggactatacagtggtgaagatgtcagtg
actgatgatgatgaaccacagtctcctgcctgggcagcaaaattcaagattgttagtggt
aacactggtggggttttcagtgttagcacaggaccaaacaaacaggagggcatcattact
actgtcaagccattggactatgaaaccaacaggaaatacacattgctggtagctgtggaa
aatgaggttccgtttgctaaacctttgcctacctccactgccactgtcattgtaaatgtt
gacgatgtgaatgaggctccagtattcaatccaccagagaagtccatttctgtatctgaa
gatgcagcagttggtaatgacctgacgacctacacagccactgatccagacactgcgagg
tcccagaaactgacgtatcgtgtaggtagtgatcctgccggctggctaaatattgacaaa
gacactggacttatcaaagtcagaagtccactggaccgagaatctccttttgtgaaaaat
cacaaatacacatccctaattctagctgtggacgatgatgctttgccagcaactggtact
ggtaccctattaattgagttaacggacgtaaatgataacgccccaacaattgaagaaagg
gaaatcgcagtatgtaataaggagtcaactccagtgaccctgtctgtgaccgataaggac
gggcctggttttggtgctccgtttagtgtggtgctgcaaggagatagcaagaacaactgg
actgccaagatgaacgattcaaaaacggggattgtactttcacttaagaccccacttgag
ccaggaagttacagcgttattatgagggtatttgacactggtgaccaatcacaagacaat
attctcagggccactgtatgcgactgcacaggagatgacgttaaatgctcggaaagggca
gtcgcaggattcggtctccccgcagtgctcggaattttgggggctattttggccctgttg
ttgctggtcctgctcctgcttctgttccttagaagaaaaggctcaaagaaggagcagccc
ctgatcaatgatgatgatatccgtgacaatgtttactattatgatgaggagggtggtgga
gaggatgatcaggactatgacctgagcgttctacacaggggccttgacaaccgtcctgac
gttttccgtaatgatgtggctcccacctttatgcctgctccacaatatcggccacggcct
gcgaacccagatgagattggcaacttcattgatgataacctgaaggctgctgataatgac
cccacagctcccccctacgactctctgctggtgtttgattatgagggtggtggatcagag
gcaggctctctcagctccctgaactcctgcagctctggagatcaggactacgactgtctc
ggtgaatggggtccgcgctttaagaaactagctgacatgtacggaggcggagaggactaa
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