Clarias gariepinus (North African catfish): 128519605
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Entry
128519605 CDS
T10780
Symbol
psmc3
Name
(RefSeq) 26S proteasome regulatory subunit 6A
KO
K03065
26S proteasome regulatory subunit T5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
128519605 (psmc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cgar03051
]
128519605 (psmc3)
Proteasome [BR:
cgar03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
128519605 (psmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
DUF5827
Mg_chelatase
AAA_33
PhoH
AAA_7
A-sol_ELP1
AAA_14
AAA_28
ATPase
Sigma54_activat
IstB_IS21
RNA_helicase
AAA_24
Defensin
AAA_11
Motif
Other DBs
NCBI-GeneID:
128519605
NCBI-ProteinID:
XP_053349355
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All DBs
Position
3:14536217..14543462
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AA seq
457 aa
AA seq
DB search
MSEPKGGGSSAITYLTIYTTWQRRKIKRSKMASLNDRSVWDEVEDGIGEEVLKMSTEEIV
QRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENTEKIKVNKTLPYLVSNVIELLDVDPN
DQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILE
TLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKG
VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSI
IFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPAL
LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVE
AGMIALRRGATELNHEDYMEGILEVQAKKKANLQYYA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagccgaaagggggcggcagctctgcaataacgtatttgacaatatacacaact
tggcaaagaagaaaaatcaagcgctccaagatggcgtctttgaatgacagatcagtttgg
gatgaagtagaggatgggatcggtgaggaggtcctaaaaatgtctactgaggaaattgtt
caacgaaccagactgctggacagtgaaataaaaatcatgaagagcgaggtgctgcgagta
actcatgagctacaagcgatgaaggacaagatcaaagaaaacacagagaagattaaagtg
aacaaaactctgccatatctagtctctaatgttattgagctattagatgtggaccccaat
gatcaggaggaggatggtgccaatattgatttagattctcagcgaaaggggaagtgtgca
gtcattaaaacatccacacgacagacatattttctgccagttattggcttggttgatgcc
gagaaactgaaacctggtgatcttgtgggtgttaacaaggactcatatctgattctggag
actctgcctacggagtatgactctagagtgaaggccatggaggtagatgagaggcccact
gagcagtacagtgatattggaggccttgacaagcagatccaagaattggtggaagcaatt
gtcttacccatgaaccataaggaaaagtttgagaatttgggtatccagccaccaaagggt
gtcctgatgtacggaccacctggaactggcaaaactcttctggccagagcttgtgctgca
caaaccaaagcaacattcctaaagctagcaggccctcagttggtgcagatgtttatagga
gatggtgcgaagctggtacgtgatgcatttgctctggctaaagaaaaagccccttcaatc
atcttcatcgatgagctggatgccatcggaaccaagcgttttgacagcgagaaggccgga
gacagagaggtgcagaggactatgctggagttgctaaaccaacttgatggcttccagcct
aatatgcaagtcaaggtgattgctgctactaacagagtggacatcctggaccctgcattg
cttcgctcaggccggctggatcgtaagatcgagttccccatgccaaacgaagaggctcgt
gctcgtataatgcagatccactcacgcaagatgaatgtcagtcctgatgtgaactatgaa
gagttggctcgctgcactgatgactttaatggtgctcagtgtaaagctgtctgtgtggaa
gcgggcatgattgctcttcgccgtggggccaccgagctgaaccatgaagactacatggag
ggtattctggaggtccaagccaagaaaaaggcgaacctgcagtactatgcttaa
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