Clarias gariepinus (North African catfish): 128519618
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Entry
128519618 CDS
T10780
Symbol
prf1.3
Name
(RefSeq) perforin-1.3
KO
K07818
perforin 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128519618 (prf1.3)
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Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
128519618
NCBI-ProteinID:
XP_053349382
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Position
3:37069904..37077424
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AA seq
568 aa
AA seq
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MQPQTHRATEMLPHILLLISVSLSSCCRVAPVTECGTPPFVPGHNLVGEGFNIVNMKTTG
AFVVNVQDYITGGEHGNCTICKNTLLNREEKLPSAVTDWRIKVGCKRSISSRVYESSSSV
MKQSTSSTSVGWKVGLGVPLVAGVAVGGTHSKSSTFARTRASQDKFSYTNHQVSCRYYSL
RVKANPPLTKEFLQSVNSLPVPYNPQADAAYRHFISVYGTHYLRHVKLGGRVQTTTAVRT
CQISMSGLSVHDVSNCLSAEASVVIEGIEVKGKAGFCKSKQNKLENKSSFSATFRDRVTE
IWGGKGANADLLFSPGKQHGFTEWMKTLQTVPGVVSYTLTALHMLVENNPARKKALGEAI
TKYIMSNAIPLSCNSNCRTGHRTPDCACKCGGHQNINSNCCPSHPGVATLTVKVERAAGL
YGDYITKTDGYVKVFYEKKGQETPVIWNNDFPNWNYVAQFGTVNLASKQHVRFEVWDRDN
RWDDDRLGTASIVPTQGVNVRKQFPLKHGTLFVSITAICGPHLQGEVCERYAPSPEAPPL
LTYSQLLQNQRHTWAGENYGTGRNATML
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctcaaactcacagagcgactgagatgctcccccatatcctgctcctcatctcc
gtctccttgtcctcatgctgccgcgtggccccggtcaccgaatgtggcacccctccgttt
gtgcccggtcacaacctggtgggtgagggcttcaacatcgtgaacatgaagaccacgggt
gcgttcgtggtcaacgtgcaggactacatcaccggcggcgagcacggaaactgcaccatc
tgtaagaacaccctgctgaaccgtgaggagaagctcccgtccgccgtcactgactggcgc
atcaaggtgggctgcaagcgcagcatcagctcccgggtatacgagtcgtccagctcggtg
atgaagcaaagcaccagctcaaccagtgtggggtggaaggtgggtctcggggtgcccctg
gtggccggggtggcagtcgggggcacacactccaaatcctccacctttgcacgcacacgc
gcctcccaggacaagttctcctacaccaaccaccaggtctcctgccgctactacagtctc
agagtaaaggccaatcctcctctgactaaagagttcctccagtcagtgaattctctccct
gtgccctataaccctcaggccgatgccgcttaccgtcactttatctccgtctacggcact
cactatctgcgtcatgtgaaattaggcggccgtgtgcagaccaccaccgccgtgcgcaca
tgccagatttccatgtcgggtctctcagtgcatgacgtcagtaactgtctctctgccgag
gcgtcggtcgtaatcgaaggcatcgaggttaaaggcaaggcagggttttgtaaaagcaag
caaaataaacttgagaacaaaagcagcttcagcgccaccttcagggatcgtgttactgag
atttggggcggcaaaggagccaatgcagatctcctgttctccccggggaaacagcacggg
ttcacagagtggatgaagacgctgcaaaccgtcccgggagtggtgtcctacaccctgact
gcactgcacatgcttgtggagaacaacccggccaggaaaaaagctctgggggaagccatc
accaagtacataatgagcaacgcaattcccttatcctgcaactccaattgtagaactgga
catcgtactcctgactgtgcgtgcaaatgcggaggccatcagaacatcaactcaaactgc
tgtccgagtcatcccggagtcgcgaccctgaccgtcaaggtggagcgcgctgccggactc
tacggagattacatcaccaaaactgacggctacgtcaaagtcttctacgaaaagaaagga
caagaaacgccagtcatatggaataatgacttccccaactggaattacgtggctcaattc
ggaacggtgaacctggcatcgaaacagcatgtacgctttgaggtgtgggatcgggataac
cgctgggatgatgaccgtctgggcacggccagcatcgttcctacacaaggtgtcaacgtg
aggaagcaatttcctctgaagcacggcacactcttcgtctccatcacagccatatgcggt
ccgcatcttcagggggaagtgtgcgagcgctacgccccttcacctgaggccccgccattg
ctcacctactcccagctgctccagaaccagcgccacacctgggccggggaaaactacggc
acagggcgaaatgccacaatgctgtag
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