Clarias gariepinus (North African catfish): 128519670
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Entry
128519670 CDS
T10780
Symbol
itga11a
Name
(RefSeq) integrin alpha-11a
KO
K06587
integrin alpha 11
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04810
Regulation of actin cytoskeleton
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128519670 (itga11a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128519670 (itga11a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128519670 (itga11a)
04810 Regulation of actin cytoskeleton
128519670 (itga11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128519670 (itga11a)
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin alpha subunits
128519670 (itga11a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_A_Ig_3
Motif
Other DBs
NCBI-GeneID:
128519670
NCBI-ProteinID:
XP_053349461
LinkDB
All DBs
Position
3:complement(7723922..7779966)
Genome browser
AA seq
1189 aa
AA seq
DB search
MEYYCTLLLWILCPWPGLYDCFNIDTKSHRVIKGPKQAQFGYTVQQHIASGQKWLLVGAP
LETNGQHQTGDVYKCSLSRRTPGPSCTKLNLGKISLTNVSERKEKMRLGMTLTSNPKDNS
FVACGPLWSYECGSSYYSTGICSRVNASFKFSRTIAPAFQRCETYMDIVIVLDGSNSIYP
WYEVQDFLINILQKFYIGPGQIQVGVVQYGEKVVTEFNLNDYRSVEEVVKAARQIEQRGG
EETNTALGIDVARSQAFKQGGRRGAKKVMIVITDGESHDSPNLKQVIEDCEKDDIVRYAI
AVLGYYNRRGIDAKAFLKEIKDIATDPDDKHFFNVTDEAALKDIVDALGERIFSLEGTSK
NGTAFGLQMSQAGFSTHVVEDGILVGAVGAYDWNGAVLKETRHGKVVPPKSSYAQEFPEE
LKNHGAYLGYTVTSVVSARSGQLYVAGAPRFNHTGKVIIFTLKNTGELNILHSLKGHQIG
SYYGSEIAAVDIDGDGVTDNLLVAAPMFFSGGWERGKVYIYRITDQPRFILEGVLELTDI
SENARFGSALAPVSDLNGDSFNDLVVGAPLEDEHRGVIYIYNSQRNRILRKYKQRISAAE
LASGLQYFGRSIHGKMDMNGDGLVDLAVGSLGAAVLLWSRSVIRIHAAVRFEPSKVNIFN
KDCRRSGKDVTCMSAIVCLNVTARTVIRPTQEVGLWSNTYIEEKRFNPRAVMDELDRQQP
QNFTLLPGEEHCEHIYFHVMETTDYARPIIFTVETGLQDPNNGPTLDDTWPTTTRTQLPF
WNGCDEDDHCVPDLVIQSQTDLISRKQFCGQVFRLSSALCLSQTVPEDNERVIEASRKKM
VVDVRLENRGENAYGARLNISYSKNLQFSSLIVKDNSDIQIDCRSGDKQRNEKYCDVGAP
FMRAKTQVTFRLEFEFISSVLLDHVRVILAAGSDGEEVALHDNNNDIFYKLRYESDLLFT
RDSNPSHWELKANLGLEKAENLRPPFNFTFQIQNLGYFPVRNLQLNIMIPEVTKNGNRFL
QIQQLHIDQVDGTRCIPPQHVAHSRATPEDLSRVSHLNYTNSLAVPIQCNVNLSSYREVA
VRISGSLRVDALHELKFKTLELVTTASVELSQASPMFLQEERPVRHIILEVRKEEDYRVP
IWIIIGSTLGGLLLLSLLILALWKLGFFQRQKPREEAENEVNGKVAEER
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggagtactactgcactctgctgctttggatcctgtgcccatggccagggctctatgac
tgtttcaacatagacaccaagagccacagagttataaagggtccgaagcaggcacagttc
ggttacactgtacagcaacacatagctagtgggcagaaatggttgttggttggagcgccg
ttggaaacaaatggtcagcaccagacaggtgatgtgtataaatgctcattaagcagaaga
acccctggccccagctgcacaaagctcaatttaggaaagatatctttgacaaatgtctct
gaacgtaaagaaaaaatgagactagggatgacgctcacctccaatcctaaagataacagc
tttgtggcatgtggtcctctctggtcatacgaatgtggtagctcctactacagcacagga
atctgctccagggtcaacgccagctttaaattctcacgcaccatcgctccagctttccaa
agatgcgagacctacatggatattgttatagtcttggatggatctaattccatttatcca
tggtatgaagtgcaggactttctcatcaacattctacagaaattttacatcggaccaggg
cagatccaggttggtgtggtacagtatggggaaaaggtggtgacagagttcaacctaaat
gattaccgctcagtggaggaagtggtgaaggcagctcgacaaatagaacagagaggcgga
gaggagaccaacactgcattgggcatagatgtggcacgatctcaggcctttaaacaaggt
ggaaggagaggagccaagaaggtcatgattgtcataacagatggagaatcacatgacagc
cccaacctaaagcaagtgatcgaggactgtgaaaaggatgacattgttcgatacgctatt
gctgtccttggctactacaatcgtagagggattgatgcaaaggcttttcttaaagaaatc
aaagacattgccactgatccagatgataaacatttcttcaatgtgactgatgaagctgcc
ttgaaagacattgtggatgccttgggggagaggatattcagtttagaaggaaccagtaag
aatgggacagcatttggtctccagatgtcccaggctggtttctccacacatgttgttgag
gatgggattcttgttggtgcagttggggcatatgattggaatggagccgtgttaaaggag
acacggcatggtaaagtggttccccccaagtcctcctacgcgcaggagttccctgaagag
ctaaagaatcatggagcttacttgggatacacagtaacctcagtggtttcagcgcgtagt
gggcagctgtatgtggctggagccccacgttttaaccacacaggcaaagtgatcatcttc
accctcaagaacacaggagagctcaatatcttgcattcactgaagggacatcagatcggc
tcatactatggcagtgagattgctgctgtggacattgatggggacggagtcactgataac
ctgcttgttgctgcaccaatgttctttagtggaggttgggaaagaggcaaagtgtacatc
taccgcattaccgaccagccccggtttatcctggagggagtgctggagctcactgatatt
agtgagaatgcaaggtttgggtctgccctagcaccagtatctgatctaaatggagactcc
tttaatgacctggtggtaggagctccgttagaagatgagcaccgaggagtcatttacatc
tataacagccagcgcaacaggattctgaggaagtataaacagagaatcagtgcagcagag
cttgcttctggtttgcagtattttggcaggagtatccatggaaagatggacatgaatggt
gatggtctggtggacctagctgtgggctctctaggtgctgctgtactcctctggtctcgc
agtgtgatccgcatccatgccgctgtccgtttcgaacccagcaaagtcaacatcttcaat
aaagactgtaggcgcagtggaaaggatgtgacgtgtatgtcggctatcgtgtgtctgaat
gtcactgccaggacggtcatcaggcccacacaggaagtaggtctttggtccaatacctat
attgaggagaagcgttttaaccctcgggctgtgatggacgaactagaccggcagcagcca
caaaattttactttgcttcctggagaggagcattgtgaacacatctacttccatgtaatg
gaaacaacagactatgccagacctatcatattcactgtagaaacaggtctacaggatcca
aacaatggtcccaccttagatgatacctggccaactaccaccagaacccagcttcctttt
tggaacggctgtgatgaggacgatcactgtgttccagacctggtgatacaatcacagact
gacttgatcagccgcaagcagttctgtggacaggtgtttcgattgagcagtgcattgtgt
ctaagccaaactgtacccgaagataatgagcgtgtgatagaggcttctaggaaaaagatg
gtagtggacgttcgtttggagaaccgaggagaaaatgcttatggagcccgcctcaacatc
tcatactccaaaaacctacaattctccagtcttatagtgaaggacaattcagacatacag
attgactgtcgcagtggagacaagcaaagaaatgagaagtactgtgatgtgggcgctccc
ttcatgagagctaaaacacaggtcactttccgtttggagtttgaatttattagctcggtg
ttgctggaccatgttcgggtcattctggcggctggaagtgatggagaagaagtcgcttta
cacgacaataataatgacatcttctacaagttaagatacgagtctgacttgctctttaca
agagattccaatccatcacattgggagctcaaagccaacctaggtctggagaaagcagag
aacctacgtccaccctttaactttactttccaaatccagaaccttggctacttcccggtg
agaaatttacagctcaatattatgatcccagaagtgacaaaaaatgggaatcgcttctta
cagatccaacaacttcatatagaccaggtagatggaactcgctgcattccacctcaacac
gtagcccacagtcgagcaacaccagaggacctgagtcgtgtttctcacctgaattatacc
aactccctagcagtgccgattcagtgcaacgtgaatttaagctcctatagagaagttgct
gtgagaatcagtggatccctacgtgttgacgctcttcatgaactgaagtttaaaactctg
gagctggtgacgacagcctcggtggagctgagccaagccagtcccatgtttcttcaggaa
gagaggcctgtcagacatataattctggaagtgaggaaggaggaagattatcgtgttccc
atatggattattattgggagtacactaggcggacttttgctactctccctccttatttta
gctctatggaagctgggattttttcagagacagaagcccagggaggaggcagaaaacgag
gtcaacgggaaagtagcagaggagcgataa
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