Clarias gariepinus (North African catfish): 128519720
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Entry
128519720 CDS
T10780
Symbol
nbn
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03440
Homologous recombination
cgar04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128519720 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
128519720 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgar03032
]
128519720 (nbn)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128519720 (nbn)
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
128519720 (nbn)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
128519720 (nbn)
BRCA1-C complex
128519720 (nbn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
PCNA_C
MU2_FHA
Motif
Other DBs
NCBI-GeneID:
128519720
NCBI-ProteinID:
XP_053349519
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Position
4:complement(9280375..9300910)
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AA seq
834 aa
AA seq
DB search
MWRLIPAESGTGPISLLAGKEYVVGRKNCDVLLSNDQSISRVHAHITVTEQAVTLKDSSK
YGTSVNDKRLETGATKTVYAGDKLTFGVFQSKFRLELDSVVVCSSCVDNEGKAALSKEVQ
ALGGRLVNTWSQECTHLVMPTVKITIKTICALLCCRPIVKPQFFTELSRAVRQRENLPKA
QSFRPEIDEPSLSKEKVDLGPRQERKTLFAGKTFVFLNSKQMKRLSQAISFGGGKSQLLE
EGALPVSLLESKKTCVVDVTTGSSQPLIPPTTKKFAESISLILQRNGLRFIAESEIGLAT
IYVNNQTHCNPCSSLDSESVKMRPAIPEATLSQNAAVDETVLHGGSLNITAYVVNTEPSQ
SFSRKDICGTTAVGETPEKRSTNPTCPTSSKKPPRVPEPPAACSEPVSSSFSEVQEEKRS
NSEGQKSDRCAKFTSPLSSATFKKSPQKQVSLTSYFKPTNKKRLREGSTDSELPEVKLSR
LEDEGSKEAKNSNVAPSLKSSSTRLGSQTGQNQQNTTSRCSVSGSLGLGSGLATDSRSGS
GKQNRGLDLDLDLNFSSKKRKEPEQDPAAPADLDVSLEELESIMSVDMDEPLQPTANKKQ
CLEQGERSTASAGGDCSGIFSKQKRAEEHRSTSWSSSWNSEKDRQESTRRGSERKPRLTA
STSQGLEREQHSSSHRIDDCETLDVKEEQVSFLLETKVKDGSIKHNEEAAIKEESMGSSS
GSGPEKDPDLPRKLLQVQFMSLTMSAPSRTRTEPLQSRDRNGKNFKHFRKVPVPGILGLP
KIIGGSDLVAHNRSKNSELEEWLKDAAEQEKHQEREETLGDDLFRYNPKTVKRR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtggagattaatccctgcagaatcggggacaggtccaatctctttgcttgccggtaag
gagtacgtagtgggacgtaagaactgtgacgtcctactgtccaatgaccagtcgatcagc
cgcgtgcatgcccacatcaccgtcactgagcaggctgtgacactgaaggacagttccaag
tacggcacttctgtcaacgacaagcggctggagactggcgccaccaaaacagtctacgct
ggggacaaactgacattcggggtctttcagagcaagtttaggctggaactggattccgtg
gttgtttgttcatcttgtgttgataatgaagggaaagcagctctctccaaggaggtccag
gctcttggggggcgtctggtcaacacctggtctcaggagtgcactcacctggtcatgcct
actgttaaaatcaccattaagacgatctgtgcgctgctgtgctgtcggcccatagtgaaa
ccccagttcttcactgagctttccagagctgttcggcagagggaaaaccttcctaaagca
cagagctttaggccggagatcgatgagccgagtctcagtaaagagaaggtggacctggga
ccccgtcaggagagaaagactctgtttgcaggcaaaacctttgtcttcctcaactccaaa
cagatgaaacgcttaagccaggccatcagtttcggaggtggaaagagccaactcttggaa
gagggagctctgcctgtgtcactcctagaatccaagaaaacttgtgttgttgatgtgaca
actggatcgtctcaacctctcatacctccaactaccaagaagtttgcagagtcaatcagc
ttgattctacaaagaaatggtctacgtttcatcgctgagtcagagatcggattggctacc
atttatgtcaataatcagacacactgcaatccctgctcgtctttagattccgaatctgtt
aaaatgaggccagcgatccctgaagcaacactttcccaaaatgcagcagtggatgagact
gtacttcatggaggctctttaaacatcactgcctatgttgttaatacagagccatctcag
agtttcagcaggaaggacatatgcgggacaacagctgtgggtgagaccccagaaaaacgg
tctacaaatccaacgtgtccaacatcatccaagaagccaccaagggtcccagagccacca
gctgcctgctctgagcctgtgtcgtcatcattcagcgaagtccaagaagaaaagaggtct
aattcggagggccagaagagtgatagatgtgctaaatttaccagtcctttaagcagtgcc
acttttaaaaaatccccacagaaacaagtgtcgctcacttcctacttcaagcctaccaac
aaaaagaggctgcgtgagggcagtacagactccgaactacctgaagtcaaactctccaga
ctagaggatgagggaagcaaggaggccaagaactctaatgtggctccgtctctaaaatcc
tcttccaccagattaggttcacaaacaggccagaaccagcagaacacgacctcacgctgc
agtgttagtggcagtctcggtttgggttcaggtcttgccacagattccagatcaggtagc
ggcaaacaaaatcggggactggatttagatttagatttgaatttcagctccaagaagagg
aaagagcccgaacaggaccctgcagcgcctgctgatttggacgtttctctggaagagctc
gagtccatcatgtctgtggacatggacgaacctctgcagcccacagctaataagaagcag
tgtttggagcaaggggaaagaagcacagccagtgcagggggggattgcagtggtatattc
agcaagcagaagagagcagaggaacaccgaagcacaagctggagctcaagctggaactca
gaaaaagacaggcaggaatcaaccagacggggctcggagagaaagccacggctcacagcc
agtacttctcagggtctggaacgggaacagcacagttcatcacacagaattgatgactgt
gaaactttagatgtcaaagaagagcaagtttcttttcttttggaaactaaagtcaaagat
ggttccatcaaacacaatgaggaggctgcgataaaggaagaatccatgggctcaagctca
ggctctggtcctgaaaaagatcctgaccttcctaggaagcttttgcaagtccagttcatg
tccctgactatgagcgcccctagcaggacgaggaccgagccactacagagccgcgatcgc
aatggaaagaattttaaacatttccgtaaggtccctgttcctgggatcctggggctcccc
aaaatcatcggcggctctgacttggtggctcataaccgaagcaagaactcagaactcgag
gagtggcttaaggatgcagctgagcaagagaaacatcaagaacgagaagagactctgggt
gatgatctgttcaggtacaatccaaagactgttaaaagaagatga
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integrated database retrieval system
