Clarias gariepinus (North African catfish): 128519722
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Entry
128519722 CDS
T10780
Symbol
si:dkey-22o22.2
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Cell adhesion molecules [BR:
cgar04515
]
Cadherins
Cadherin related
128519722 (si:dkey-22o22.2)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128519722
NCBI-ProteinID:
XP_053349522
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Position
4:27842043..27958921
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AA seq
2869 aa
AA seq
DB search
MKTRRREMKLLGCVDAGFLAVFLSFSVVVANSMVYYGQVEENAPVGSVVLHFGLECKESG
SLGLRSTLRGENASDFSLLYSSKTGFLLKTAKSLDRELKSKYEVRALLPGCASDAVAINI
EVLDKNDNPPQFLTSTERIEINELTAVGSELLLLSARDRDAGRNAAITFFTAPNPNIHVI
PKTGQVVLVRSVHAPANLTVPIYARDHGDAALLSEPLQLHVGVTSARTFLPAKGRIARTP
RAVSEELSYTVALSEYAEAGDVIFTVPDQKFEEKRFESLSPEAGSAVRVERETGRVYLMH
QLTSSTQLVVKILNARGDEWYLCRLSVTLPGMSDLQWAMFPEPYLATVEPGAAPGSLVYK
LVTQQRDGSLEVAQFLLVDGGEDCFEVDRSSGDVRTTGRPLSPGKEYTLTVQAVDTQGRK
GPHASVAILVGLRPPQFSNISYSIYIPESTGVGQAVAVVQAVSFQKKFLSYMLTVNSGNL
FSINQESGALSLTHAVDYESGPHLHHLQIRASEPDTGLSNVAGVVVHITDENDCTPEFMH
SIYSRDNIPETTPPGTSLLQVLARDCDTGLNAEISYFTQSQDFSVSSQGVVSPSRKLDYE
RPNHMYECVVVAVDKGTPSRTGTASIRIRMANVNDEAPVFTQTVYKTFLSEDAGPETLVA
TVHAKDPDGDGVTYAITGGNEDSNFELDNQKGIIRLRRSPPPKLRGLQYVLNITATDDNA
AGGPLPLSSSAQVIVGINDINNNKPVFEECHNYSLNALVPENQPPGTVVLRVQAHDADTG
VNGEVKYGIMQRDGASPGFTIDPNTGVISTAVSFDRERQREYTLSVTATDQAEEPLIGIC
QITVLIGDQNDNDPKFENSRYQYFLREDTPVGTSFLRAAAHDDDQGTNSAIMYSLTHQTP
AYLHINPSTGWVYVNHPISQTSRISQQIMATDGGNRSSSVDLTVIITNMHNQPPQWEQEE
YWVTIPENTVRDSKIVTIKATSPLGDPRVTYNLEEGQVPETNMPVRFYIKPNRKDSSASI
LVAEPLDYETTRFFTLRVRVQNVAAVPLASFTTVYVNITDVNDNVPFFMSSTYEATVPEG
AEIGTSVAQVSASDLDSGLHGMVNYIILKDQSGDSQFFSINPYTGIIHTRATFDREQKSS
YLIEVQSQDSSESARPGQQGQPNSDTAYVRIFVTDVNDNAPAFSLPVYEISVEEDKEVGY
VVITVTANDEDEGANAKLRYQITSGNTMGTFDVEPEIGTIFIAQRLDYERVQRYHLRLVA
SDGKWENQTVVIINIINQNDEAPIFSQTEYHTSVTEELIELPVLVLEVSATDPDQEADQS
AVRYSLHGQGAGSEFTIEELTGKIYAQKRLDREERSAWRFLVLATDENGDGLTGFADVLV
EVRDINDNAPQFLCASEGCFMGHVPENSPADTSIMEMQATDLDDPKTSKNAVLTYRIVQN
VRNEINLNLFSINPATGTIYTVLRSLDREVEDHYYVVVEARDGGGLSGTGTATIVVSDVN
DHPPVFTQRVYMATMAEDLDINSEVLVVTATDGDGGENSVMTFSIIGGDDDRKFFIETDK
GNRQGVVRLKKKIDFEKPHERTFNLTVKVEDADFYSLAYCVIHVEDSNDHAPVFFPQFYD
AGSMFEDVPLGTIVTQVTATDLDSGQNGKFSYSIAPESDPFQQFLVDRSGWVVIANSLDR
EKVSQHRLIILATDMGNPSLTGSAIVLVAVQDVNDNGPEFEVLYRPIVWENTIAPQLVHM
NETSILLHVMDRDSLPNTGPFSIYLLMITSDATNFNLTDLRNGSAMITALRTFDREQQKE
YLLPILMTDSGSPPMSSTSTLTVVIGDKNDHPHSPGHSEFIVYNYEGTLPTTVLGQVQSP
DVDDWSEKVYKFEDRLPRQFILNQNSGQLSIKSGTPAGTYSLQVRVADKSWPDVTSTVEI
TVRELKEEALLNAGSLRFSNITAEELFRASDDEESLYMRLQRLLSEVLQTDLDKVQIFSL
ASSSHSSQQHLSLWFAASGSPYYKPERLHGSVAMHKAKLESALGVTILQVGVDECAYADC
SPAGGCSSRVTFSDTPLVLNSGNASLVSVLATAAALCGCLARESKHMSCSSYPHTPCLNG
GSCVDTDMGYRCQCPPLFDGPECQQTKHTFLGDGYAWFPPIKPCFRSHISLEFITESDDG
LLLYNGPVGALQHGDKEDFIAFELKKGTPVLSVNHGSGTVTLQLPAHSSLSDRRWHHIDI
ISDGKEVHLIVDHCSGAIVNEGEGLGEDIFETDQSGCKVSGHTPGTERFLNVNQPLQLGG
VKDTYPLRQTHTNYKGFVGCIRNLVVDTQVYDLSSAAESMNSAPGCSLTDGVCVTAGGPS
CGLRGKCLGEWGSFSCDCHPGYSGHKCDKALPEWSFEKESMLRYQLRTGLSPRRTHAQFL
IRTRSSSGILLSMSSRDSSEFIILEIVDGYVRVRTNLGDGPHTLKLGSQRVDHGQWVLVS
LSRHDNVFTLQLEQGGGSREVTGVLGTKREIVVHSSNVLLGNAASHSTQGDFQGCMRDVR
LNGHSLSLDGQSSEFVTVLERQGIQAGCHSDACRAKPCQKPLYCVDLWRKHECRCPAGQL
AVVDEHTGLVSCAMSPCGPSTCRNGGTCLAHSTKSYQCRCPKDFRGQWCEISQVKTSHLA
ALSPSSILAISMCLLVFFAVLVAVTVWNQKGSENKFRKRGVYHIPAEHESWEDIRENILN
YNEEGGGEQDQNAYDITELKRPFCSSLSQSSSCTTAPLIKSSQGSQEEVHPGGVQPTPHN
NPTATGHCAVDFKNYVARIIWEADNDVLAFPMDTYHVYCVEGAGSNAGSLSSLSSAIPEE
DFSYDSLQHWGPKFEELYQRPEVGFANTDVMQSHSHTGERSLEQLHQTQ
NT seq
8610 nt
NT seq
+upstream
nt +downstream
nt
atgaagacacgtcgacgagagatgaaacttttaggatgtgtggatgcaggttttctcgct
gttttcctttcgttctctgtcgtggtcgcaaattctatggtttattatgggcaagttgag
gaaaacgcgcctgtcggctctgtagttttgcatttcggactcgaatgcaaagagtcaggc
tcgttgggactcaggagcactttacgcggggaaaacgcatcggatttctcacttttgtac
tcatcaaaaacagggtttctcctaaaaaccgcgaaaagtttggacagggaactcaagtcg
aagtatgaagtgagagcgcttttaccaggatgcgcgtcggacgcagttgctataaacatc
gaggtcctggataaaaacgacaatccgccgcagtttctcacttcaaccgagcgcatagaa
attaatgaattaacagctgtagggagcgagctgctgctcctgagcgcacgggacagggat
gccgggagaaacgccgcgatcaccttctttacggctccaaacccaaacattcacgtgatt
cctaaaaccggccaagttgtcttggtccgctccgtccacgcgcccgctaacctgaccgtc
ccgatttacgcgagagatcacggagacgcggcgctgctgagtgaaccgctacagctgcac
gtcggagtcaccagcgcgcgaacctttctcccagccaagggaaggattgcgagaactccg
agagctgtttctgaggagctcagctatactgtagcgctgtcagaatacgccgaagcagga
gatgtgatcttcactgtcccggatcagaagtttgaggaaaagcgtttcgagtcgctgtca
ccggaagcgggttcagcagtgcgcgtggagagggaaactggacgagtctacttaatgcat
cagctaacttcttccacacagctagtggtgaaaatcctaaatgccagaggtgatgagtgg
tacctgtgcagactatctgtaacccttcctggcatgtcagatctgcagtgggctatgttt
cccgagccgtatctcgccacagtggagcccggcgcagctccaggatcgttggtttacaaa
cttgtaacccaacagagggacggctctttggaagtggcccagttccttttggtggatgga
ggtgaggattgttttgaagtggacaggagctcaggagacgtaaggaccacaggacgacct
ctgagccctggtaaagagtacactctgactgtacaggctgtggacactcagggcaggaag
ggtcctcatgcctcagtggccatactggtaggcctgcgaccccctcagttctccaacatc
tcctactccatctacatcccggagagcaccggagtgggccaggctgtggctgtggttcag
gctgtctctttccagaagaagtttctgtcctacatgctgacggtgaactcaggcaacctg
ttcagtataaaccaagagagcggcgctctgagtctgacccacgctgtggactacgagagc
ggacctcaccttcaccacctgcaaatccgtgcctctgaaccagacacaggcctcagcaac
gtggcaggggtggtggtgcatatcacggatgagaatgactgcactccagagttcatgcat
tccatctacagcagagataatattccagagacaacgccgcccggaacatctttactgcag
gtgctagccagagactgtgacactgggctgaacgcggagatatcctactttacccagagt
caggacttttctgtttcatctcaaggcgtggtcagccccagcaggaagctggactacgag
agacccaatcacatgtatgagtgtgtggtggtggctgtagataagggcacaccctcccgc
acaggcaccgcctccatccgcatccgcatggccaacgtcaatgatgaggctcctgtcttc
acccagactgtctataagacctttctgtcagaggatgctggtcccgagactctggtggcc
actgtgcatgccaaggacccagacggggacggggtgacgtatgccatcactgggggaaat
gaggacagtaactttgagttggacaaccagaaaggcatcatcagactgcgccgtagtcct
cctcctaagctgcgtggactccagtatgtcctcaacatcacagcaacggacgacaatgca
gccggcggcccgttgcccctcagtagctcagcacaggttatcgttggcattaatgacatt
aacaacaacaaacctgtctttgaggagtgccataattacagtttgaacgctctggtgccg
gagaaccagccaccaggaacagtggtcctgcgtgtgcaagctcatgatgctgacactggg
gtcaacggggaggtcaagtatggaatcatgcagcgtgatggagcctcaccagggttcact
atcgacccaaacacaggggtgatcagcaccgccgtgagcttcgatcgagagaggcagaga
gaatacacgctgtccgtcacagccacagatcaggcagaggagccgcttattggcatctgt
cagatcaccgtactcatcggagaccaaaatgacaacgaccctaagttcgaaaacagccgc
tatcaatacttcttgagagaggacacacctgtgggcaccagctttctgcgagcggcggcc
cacgatgatgaccagggcaccaactcagccattatgtactccttaactcatcagactcca
gcctacttacacatcaatccaagcacgggatgggtgtacgtcaatcaccctatttcacag
acctcacggatcagtcaacaaatcatggctacagatggaggaaaccgcagcagctcagta
gacctcactgttataatcaccaacatgcacaaccagccaccacagtgggaacaggaagaa
tactgggtcaccattcctgagaacactgtgcgcgacagcaagatagtgaccattaaagca
acgtctcctcttggtgacccccgtgtgacctataaccttgaggagggtcaggttcccgaa
actaacatgcctgtgcgtttctacatcaaacccaaccgaaaggacagttcagcctctatt
ctagtagctgagccgctggactatgagaccactcgcttcttcaccctgcgtgttcgtgtg
cagaatgttgcagcagtcccactcgcctctttcaccactgtctatgtcaacatcacagat
gtgaatgacaatgttccattttttatgtcgagcacgtatgaagccacagtacctgaaggg
gctgagattggcacttcagtggcccaggtttcagcctctgacctagactctggtcttcac
ggcatggtcaattacatcatcctaaaggaccagagtggagactctcagttttttagcatt
aacccatacacaggcatcatacacacccgagccacttttgaccgtgaacagaagagttct
tacctgattgaggttcagtcccaggacagctcagagtcggcccgtcccggacagcagggt
caaccaaattcagacacagcctatgtcaggatttttgtcacagatgtaaatgacaacgcc
ccagctttctccctgcctgtatacgagattagtgtggaggaggacaaggaagtgggctac
gtagtcattaccgtcaccgctaatgatgaagatgagggtgctaacgcaaagctgcgttac
cagattacctcaggaaacactatgggcacctttgacgttgagccagagattggcaccatc
tttatcgcccagcggctggattatgagcgagtgcagcgctaccatctacgtttggtggca
tcagatggaaaatgggagaaccaaacagtagttatcatcaacatcatcaaccaaaatgat
gaagcgcctatctttagccagacagagtatcataccagtgtaacagaggaactcatcgag
ctgcctgttcttgtgctggaggtttcagctacagatccagaccaggaggcagaccagagt
gcagtccgatattcattacatggacagggtgctgggagtgaatttactatagaggagctg
actggaaagatttatgcccagaagcgtcttgaccgagaggaacgttcagcttggcgattt
ctagtgttggccactgacgaaaatggtgatggcttaactggctttgctgatgtgttggta
gaagtgcgtgacataaatgacaacgctcctcaattcttgtgtgcctcagaaggatgtttt
atgggccatgtgcctgaaaactccccagctgatacctccatcatggaaatgcaagccact
gacctggatgacccgaaaaccagcaagaatgctgttcttacctacaggattgtccagaat
gtacgtaatgagatcaatctcaacctattctctatcaatccagcaacgggcaccatctat
acagtgctcagatctttggacagggaggtcgaggaccattactatgtagttgtggaggca
agggatggaggaggcctctctgggacaggaacagccacaattgtagtttcagatgttaat
gatcaccctccagttttcacacagagagtctacatggccaccatggcagaggacctggac
atcaacagtgaagttctggtagtgactgccacagatggggatggaggagagaactctgtg
atgactttcagcattataggtggagatgatgaccgcaaattttttattgaaacagacaag
gggaatcgacagggtgtggtgcgactgaagaaaaagattgattttgaaaagccccatgag
cgcaccttcaatctcacagtcaaagttgaagatgcagatttctatagcttggcctactgt
gtcatacatgtcgaagactcaaatgaccacgcacctgtgttcttcccccaattctatgat
gcagggtccatgtttgaggatgttcctttgggcaccattgtgactcaagtgactgccaca
gacctggattcagggcaaaatggaaagttttcatatagcattgccccggagtctgaccct
tttcagcagttcctggtggataggagtggatgggttgtgatagcaaactcgttagataga
gaaaaagtatcacaacacagactcataatcttggctacagacatgggcaacccttctctt
actggctctgctattgttttagtggctgttcaggatgttaacgataatggtccagagttt
gaggtgctatatcgccctattgtatgggagaacacgattgcaccacagcttgtccatatg
aatgaaacatccattctgctacatgtcatggacagagatagcttacctaacacaggacct
ttttccatttatctgctgatgatcacctcagatgctacaaactttaacctgaccgatctg
cgcaatggcagtgccatgattacagctcttcgaacctttgatagggaacagcagaaagag
tacttgctccccattctgatgactgacagtggttctcctccaatgagttccaccagtaca
ctgactgttgttattggggataagaatgaccatccacattcacctggccactcagagttt
atagtctacaattatgaaggtactcttcctaccacagtacttgggcaagttcagtcacct
gatgttgatgactggagtgaaaaggtttacaaatttgaagacagactccctaggcagttt
atcctgaaccagaactctggtcagctaagcataaaaagtggcaccccggctgggacatac
agcctgcaggtgcgagtagccgataagagttggcctgatgtcacctcaacggtggagatt
acagttagagagctgaaggaggaggcactgctcaatgctggttcactccgattctccaat
ataacagcagaggagttgttcagggcgtctgatgatgaggagagtttgtatatgcgtctg
cagcgtctgctctcagaggtcttacagacggatctggataaagtgcaaatcttcagcctg
gccagcagcagtcattctagccagcagcaccttagcttgtggtttgctgccagtggctcc
ccgtactacaagccagagagactgcatggcagtgtggctatgcacaaggccaagttggag
tcagccctgggtgtgaccatcctgcaggttggggtggatgaatgtgcctacgcagactgt
agtcctgcaggtggctgttctagcagggttacgtttagtgacactcctttagtcctgaac
tctgggaatgcttctctggtttctgtcttagccacagccgcagctctgtgtggatgtttg
gccagagagagcaagcacatgtcctgctcctcttacccccataccccctgtctaaatgga
ggcagctgcgtggatacagacatgggctacaggtgccagtgtccacccttgtttgatggc
cctgagtgccagcaaactaagcacacatttctgggagatggctatgcttggtttcctcca
ataaagccttgcttcaggagccacatctctctggagtttatcaccgagtcagatgatggc
ctgctgctgtacaatggccccgtaggtgccctccagcatggggacaaggaggacttcatt
gcatttgagctgaagaaaggtacaccagtgctgagtgtaaatcacggctcaggcactgtc
acactgcagcttcctgcgcattcctctttgtctgaccggcgctggcatcacattgacatc
atcagcgatggaaaggaagtacacctgattgtggaccattgctctggagccatagtgaac
gagggggagggtttgggagaggacatattcgaaacggaccagtcagggtgcaaggtgtct
ggacacactccaggcactgagagattcctaaatgtaaatcagcctctacagctcggagga
gtgaaggacacttatccactgcgtcaaacacataccaactataaagggtttgtgggctgc
atcagaaacctggtggtggacactcaggtgtatgaccttagcagcgcagcggagagtatg
aacagtgctcccgggtgcagtctgactgatggagtgtgtgtgacagcaggagggccgtcc
tgtggcctgcgtggaaagtgccttggggagtggggctccttcagctgtgactgccacccc
gggtacagcgggcacaagtgtgacaaggctcttcctgagtggtcctttgagaaggagagc
atgctcaggtatcagttgagaacaggactcagtccacggaggacacacgcacagttcctc
atcagaacgcgctcctcatcaggcatcctgctcagtatgagctcccgggactccagtgag
ttcatcatcctggagatagtagacggctacgtgcgcgttcgcaccaacctgggtgatggc
ccacacacactgaagctggggagccaacgagtggatcacggccagtgggtcctggttagc
ttgagtcgtcatgacaacgtgttcaccctgcaactagagcaaggcggggggtcacgagag
gtcactggggtgctgggaactaaacgggagattgtagtgcattcctccaacgtgcttctg
ggaaatgctgcctcacacagcacgcagggagacttccaagggtgtatgcgagatgtaagg
ctgaacggtcactctctatccctggatggtcagagcagtgagtttgtcacggtattagag
cggcagggaattcaggcaggatgccattctgatgcctgtcgtgccaaaccatgccagaag
ccactgtactgtgtggatttgtggaggaaacacgagtgcaggtgtccagcgggtcagttg
gctgtggtggatgaacacacagggttggtgagctgtgccatgtcgccttgtggtccgtcc
acatgccgtaatggaggtacatgcctggcccattccaccaagagctatcagtgtcgctgc
ccaaaggacttccgtggccagtggtgtgaaatcagccaagttaaaacatcacacctggct
gcactcagccccagctccatcctcgctataagcatgtgcctgcttgtgtttttcgctgtg
ctggtggcggtgactgtgtggaaccagaagggcagtgaaaataaatttaggaaacgcggt
gtgtaccacattccagctgagcacgagagctgggaagacatccgggagaacatcctcaac
tacaacgaggaaggtggaggagagcaggaccagaatgcctatgacatcacagagctgaag
agaccattctgctccagcttgtctcagtcctcctcatgcaccacagctccccttatcaag
tcgtctcagggctctcaagaggaagtacacccgggcggagtccagcccacccctcacaac
aaccccacagctactggccactgcgccgtggacttcaagaactacgtggcgcgcatcatc
tgggaggctgataatgacgtgctggccttccccatggacacctaccatgtgtactgtgtc
gaaggcgcaggctcgaacgcaggcagcctaagctctctaagctcagcaatcccagaggag
gacttcagctacgattctctgcagcactgggggcccaaattcgaggagttgtatcaaagg
ccagaagtgggttttgcaaacacagatgtcatgcagagccacagccacaccggggaaagg
agccttgagcagctacaccaaactcagtga
DBGET
integrated database retrieval system
