Clarias gariepinus (North African catfish): 128519735
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Entry
128519735 CDS
T10780
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128519735 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128519735 (prpf3)
Spliceosome [BR:
cgar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
128519735 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
128519735
NCBI-ProteinID:
XP_053349538
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All DBs
Position
4:6522994..6535651
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AA seq
698 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCLGKGLDKRKTTDQLRPFLDDSAG
SFVERLFEALEESRNSRGNKGTAEKNRKRELKDVFGDEVEAQKELESSGAAAKKKRVPRF
EEVEEPEVLPGPPTESPGMLTKMQIKQMMETATRQIEERKKQLSITQPRLPLPTPQPAVT
GIRPVLPSASGPTQSIAPSQAASFMNDAIEKARKAAELQAKIQSTLAMKPGILGTVNNTG
PHNLVALANLHAMGIAPPKVEAREITKPTPLILDELGRTVDASGKEVELTHRMPTLKANI
RAVKREQFKLQLKEKPSDDLESTSFFDPRMPALTPQRQRRMFKFHDKGRFEKIGQRIRTK
VQLERLQMEIAQAAKKTGIQASTKLALIAPKKELGEGEVPSVEWWDSFILPNNIEITVQT
VFDNLEFHGITNLVEHPAQMAPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQKEVQEKV
RLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQ
RKEKKVKKLKEDLSHGVHIAVYRIRNLHNPAKKFKVEANANQLYLTGTVVLHKDVNIVVV
EGGPKSQKKFKRLMLNRIKWKELSSKRDDPDNSDDEGSKKHNKCTLVWEGTAMERSFGDM
KFKQCPTENMAREHFKKHGAEHYWDLALSESVLETADD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcccaagcgggaggtggaggagctgcggccctgggtggagcgcaccgtaaag
aaggtgcttggtttctccgaacccactgtggtcacggcggctctgcactgcttagggaaa
ggcctggacaaaaggaagacaacagaccagctgaggccatttctggatgactcagcaggc
agctttgtagagcgtctcttcgaagcgctggaagagagcaggaactcaaggggcaataaa
ggcacagccgagaaaaaccgcaagagagagctaaaggacgtattcggtgatgaggtggag
gcacagaaagagctagagagtagcggggctgcagcaaagaagaagagagtaccccggttc
gaggaggtcgaagagccagaagttctcccaggacctcctacagaaagtcctggcatgctc
accaagatgcaaataaagcagatgatggaaacagccactcgtcagattgaagagaggaag
aagcagcttagtatcactcagcccagactgcccctgcctaccccccagccagcggtcacc
gggatacgccctgtcctgccttccgcttcaggcccaactcagtccatcgccccgtcacag
gccgccagcttcatgaacgacgccatcgagaaagcacgcaaagctgccgagctccaggcc
aagattcagtccacgcttgccatgaagccaggcatccttggaactgtgaataacacagga
ccacacaacctggtggcacttgctaacttgcatgccatgggcattgcaccacctaaagtt
gaggcccgtgagatcacaaagccgacaccgcttatcctggacgagctcgggagaactgtt
gatgccagcggcaaagaagtggagctcacacaccgcatgcccactctgaaagctaatatc
agagcagtaaagcgagagcagttcaagctgcagctgaaagaaaagcccagcgatgacctg
gagtccacgtccttcttcgaccccaggatgccagcgcttacaccccagagacagaggagg
atgttcaagttccacgacaagggccgctttgagaaaataggccagcggatacgaaccaag
gttcagctggagaggttgcagatggaaattgcgcaggctgccaaaaagaccggcatccag
gcgtcgaccaagctggctctgatcgctcctaagaaggagctcggcgaaggtgaagtgcct
tccgtcgagtggtgggactccttcattctcccaaacaacatagaaatcactgttcagact
gttttcgacaacttggagtttcatggaatcactaatctggtggaacatcctgcccaaatg
gcccctccagtggatacagacaaaccggtgactctgggtgtatatttgaccaagaaggag
cagaagaagctgaggaggcagacacggcgcgagggacagaaagaggtgcaggagaaggtc
cgactcggcctcatgcccccgcctgaacccaaagtgcggatctcaaatctgatgcgtgtg
ctgggtacggaagcggtgcaggatcccacaaaagtggaggctcacgtccgagcacagatg
gccaagagacaaaaagcccatgaggaggcaaatgcagctcgcaaactgaccgcggagcaa
aggaaagagaagaaagtaaagaagctcaaggaagatctgagtcacggtgttcacatcgct
gtctacaggattcgaaacctgcataacccagccaagaagttcaaagtggaagccaacgca
aaccagctgtatcttactggcactgtggtgctgcacaaagacgtcaatatcgtggtggtg
gaaggaggacccaaatcacagaagaagttcaagcggctgatgctgaacaggattaaatgg
aaggaactcagctcaaagagagatgaccctgataactctgatgacgaagggtcaaagaag
cacaataagtgcacacttgtgtgggagggcacagcgatggagcgcagtttcggcgatatg
aaattcaagcagtgccccacggagaacatggcccgtgaacactttaagaagcacggcgcc
gagcactactgggacctggctctgagcgagagcgtactggagacggccgacgactga
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