Clarias gariepinus (North African catfish): 128519854
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Entry
128519854 CDS
T10780
Symbol
ppp2r5b
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03015
mRNA surveillance pathway
cgar04110
Cell cycle
cgar04114
Oocyte meiosis
cgar04261
Adrenergic signaling in cardiomyocytes
cgar04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128519854 (ppp2r5b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128519854 (ppp2r5b)
04114 Oocyte meiosis
128519854 (ppp2r5b)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
128519854 (ppp2r5b)
09158 Development and regeneration
04382 Cornified envelope formation
128519854 (ppp2r5b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128519854 (ppp2r5b)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128519854 (ppp2r5b)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128519854 (ppp2r5b)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
128519854 (ppp2r5b)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
128519854 (ppp2r5b)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
128519854 (ppp2r5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
128519854
NCBI-ProteinID:
XP_053349749
LinkDB
All DBs
Position
1:31232960..31261662
Genome browser
AA seq
503 aa
AA seq
DB search
MDQPTKLPPSSPSSPTAAFSVPSAEKVDGFPRRSMRRARQRRSHSSSQFRYQSSQVELTA
LPLLKEAPVAELHDLFCKKLQQCCVLFDFLDCVADLKGKEIKRAALNELVESVATSRGIL
IEPLYPEAIKMISVNIFRTLPPSENPEFDPEEDEPTLEASWPHLQLVYEFFLRFLESPDF
QPSMAKRYVDQKFVLQLLELFDSEDPREREYLKTILHRVYGKLLGLRAYIRKQINNIFLR
FIYETEHFNGVAELLEILGSIINGFALPLKSEHKQFLVRVLIPLHTAKSLSIFHAQLAYC
VVQFMEKDATVTEYIIRGLLKYWPKTCTQKEVMFLGEIEEILDVIEPSQFIRVQEPLFKQ
IANCISSPHFQVAERALYFWNNEYILSLIEENCQVILPLVFGTLYRVSKEHWNQTIVSLI
YNVLKTFMEMNSKLFDDLTASYKVEKQKELKREKERAELWKGLEEQQERRLQSLGEASRN
QRNLQERENLCKNEPESSAANAT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacccacgaagctgccgccgtcaagcccgtcctcgcccacagcggccttctcc
gtgcccagcgctgagaaggtggatggctttccacgccgctccatgcgccgggcccgccag
agaaggtcacacagctcttcgcagtttcgttatcagagctcgcaggtggagctcacagcc
ctgcctctgctcaaagaggccccagtggcggagctgcatgatctgttttgtaagaagctg
cagcagtgctgtgtgctctttgactttctggactgtgtagctgacctaaaggggaaagag
atcaagcgtgcggcactgaatgagctggtggagagcgtggccaccagccgtggcatcctc
attgagcccctctatcctgaggcaatcaagatgatctcagtaaacatcttccgtactttg
ccgcccagcgagaacccagagtttgatccggaggaggatgaacctacactggaggcctcc
tggccccatttacagttggtgtatgagttctttttacgcttcttggagagtcctgatttc
caaccttccatggccaaacgttatgtggatcagaaattcgttctacagttgctggagctg
tttgatagtgaggacccccgagaaagagaatatctgaagaccatactgcatcgtgtctat
ggcaaactgctcggcctcagggcatacatccgtaaacagatcaacaacatcttcctcagg
ttcatttatgaaactgaacacttcaatggagtggctgaactgctggagattttgggaagt
atcattaatggctttgctctgcctctgaagtcagagcacaaacaattcctggtgagggtc
ctgatccccttacacactgccaaatctctgtccatctttcatgcacagcttgcctactgt
gtggtgcagttcatggagaaagatgccactgttacagaatatatcatcagaggcttgctg
aaatattggcccaaaacttgcactcagaaagaggtgatgttcctgggggagatcgaggaa
attctggatgtgatcgagccgtcacagtttatccgtgtgcaggagccactttttaagcag
atcgccaactgcatctccagcccccacttccaggttgcagagcgggctctgtatttctgg
aataatgagtatattctgagtctgatcgaggagaactgtcaggtcatcctgcctctggtc
tttggcacgctttaccgagtctccaaagagcactggaaccaaactatcgtgtcacttatc
tacaacgtcttgaagacctttatggagatgaacagtaaactatttgatgaccttacagcc
tcatacaaggtggagaaacagaaagagctaaagagggagaaggagcgtgccgagctgtgg
aaggggctggaggagcagcaggagcgcaggctgcagagtctgggcgaagcaagtcgcaac
caaaggaacctgcaagagcgagagaacctctgcaagaacgagccggagagcagcgctgcc
aatgccacctag
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