Clarias gariepinus (North African catfish): 128519887
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Entry
128519887 CDS
T10780
Symbol
trhra
Name
(RefSeq) thyrotropin-releasing hormone receptor
KO
K04282
thyrotropin-releasing hormone receptor
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04020
Calcium signaling pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128519887 (trhra)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128519887 (trhra)
04081 Hormone signaling
128519887 (trhra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cgar04030
]
128519887 (trhra)
G protein-coupled receptors [BR:
cgar04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
128519887 (trhra)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
7tm_4
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
128519887
NCBI-ProteinID:
XP_053349803
LinkDB
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Position
4:complement(26808231..26812896)
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AA seq
403 aa
AA seq
DB search
MENVTLFGDNNTQTLGVWTDQSIEYKVVSVLLVIGVCGAGIVGNVMVILVVLTTKHMRTP
TNCYLVSLAVADLIVLTAAGLPNITESLFGEWVYGYGGCLSITYLQYLGINASSCSITAF
TVERYIAICHPIKAQFLCTLSRAKKIIVLVWAFTSLYCVMWFCLADIESQTYDNIKLSMC
AYKVSRTLYKPIYFADFTLFYVIPLLLASVLYGLIARILFLNPLPSDPKEKPQSWRKGSG
AGSKRHSKNSSFGSTAASRRQVTKMLAVVVILFALLWMPYRTLVVVNSFLNKSYSDSWFV
LFCRLCIYLNSAINPVIYNAMSQKFRAAFRKLCHCRPQSSQKPATYSMALTYSVIKETSN
GQSPDQYHTEMEELPGPSKEFLHGRKKLSYKESSLSDSMISSA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgtgacattgttcggggataataacacccagactctgggggtatggaccgac
caaagcatcgagtacaaagtggtgagtgtgctgttagtgataggcgtttgcggcgccggg
atcgtggggaacgttatggtgatcctcgtggtgctcaccaccaaacacatgcggactccc
accaactgttacctggtgagtttagccgtcgcagacctcatcgtgctgactgcggcaggt
ttacccaacatcacagaaagcctgtttggggaatgggtgtatggctacggcggctgtctg
tctataacctacctgcagtacctgggcatcaacgcgtcctcctgctccatcacagccttc
accgtggagaggtacatcgccatctgccacccgatcaaggcgcagtttctctgcaccctc
tccagggccaaaaagatcatcgtcctggtttgggctttcacctctctatactgcgttatg
tggttctgtctggccgacatcgaaagccagacctacgacaacatcaaattaagcatgtgc
gcttacaaggtgtcgaggacactctacaagccgatatacttcgctgatttcacgctgttc
tacgtcattccgctccttctggcatctgtgctgtacgggctgatcgccaggatcctcttt
ctcaacccgctgccgtcggaccccaaagaaaagccccagtcctggaggaaaggttcgggc
gcagggagcaagagacactccaagaactcctcgtttggaagcacagcggcctcgcggaga
caggtgacgaagatgcttgctgtggtggtgattctcttcgctttgctgtggatgccctat
cgtacactggtggtggtcaactcgttcctaaataaatcctactcggactcatggtttgtt
ctcttctgtcgactctgcatctacttgaacagcgccattaatcctgtcatttacaatgcc
atgtctcaaaagttccgtgctgcttttcgcaagctgtgtcactgcaggccgcagagctca
cagaagccggccacgtatagcatggcactaacttacagcgtaatcaaggaaacctccaat
gggcaaagcccagaccagtaccacacggagatggaggagcttccagggccttccaaggaa
ttcctgcatggaagaaagaagctttcatataaggagtcctcattgtcagacagcatgata
tcttcagcctag
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