Clarias gariepinus (North African catfish): 128519903
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Entry
128519903 CDS
T10780
Symbol
tubb6
Name
(RefSeq) tubulin, beta 6 class V
KO
K07375
tubulin beta
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04145
Phagosome
cgar04540
Gap junction
cgar04814
Motor proteins
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128519903 (tubb6)
09144 Cellular community - eukaryotes
04540 Gap junction
128519903 (tubb6)
09142 Cell motility
04814 Motor proteins
128519903 (tubb6)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128519903 (tubb6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128519903 (tubb6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128519903 (tubb6)
04147 Exosome [BR:
cgar04147
]
128519903 (tubb6)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
128519903 (tubb6)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
128519903 (tubb6)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128519903 (tubb6)
Exosomal proteins of colorectal cancer cells
128519903 (tubb6)
Exosomal proteins of bladder cancer cells
128519903 (tubb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
128519903
NCBI-ProteinID:
XP_053349835
LinkDB
All DBs
Position
4:33467934..33473640
Genome browser
AA seq
446 aa
AA seq
DB search
MREIVHIQAGQCGNQIGTKFWEVISDEHGVDPAGNYVGDSVLQLERVNVYYNEASSHKFV
PRAVLVDLEPGTMDSVRSGTFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDSVLDVV
RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQNKNSSYFVEWIPNNVKVAVCDIPPRG
LKMASTFIGNSTAIQEIFKRISEQFSAMFKRKAFLHWFTGEGMDEMEFTEAESNMNDLVS
EYQQYQEATANDGEDAFDEDEEEVNE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatagtccatatacaagcaggacagtgtggcaatcagattggcaccaagttt
tgggaagtcatcagtgatgaacatggcgttgatccagcaggcaactatgtgggagactca
gtccttcagctggagagggttaacgtgtactacaatgaggcgagctcacataagtttgtg
cctcgtgctgtactggtggacctggagccagggacgatggacagtgtgcgatccgggaca
tttggacagctttttagacctgataattttatctttggacagacaggtgcggggaacaac
tgggcgaaagggcactacacagaaggagccgagctagtggactcggtgctggatgtggtg
aggaaggagtgcgagcactgtgactgcctccagggctttcagctcacccactcgctggga
ggcggcaccggttcaggcatgggcacgctgcttatcagtaagatccgtgaagaatatccg
gaccgcatcatgaacacctttagcgtcatgccatcgcccaaagtgtccgatacagtagtg
gagccttataatgccacgctgtctgtgcaccagctggtggagaacacggacgagacgtac
tgcatcgacaacgaagcactttacgacatctgtttccgcacactcaagctcacgacaccg
acatacggtgatcttaatcacctggtttcagccaccatgagtggagtcaccacctccctg
cgcttccccggtcagctaaatgcagatctccgcaagctggctgtaaacatggttcccttt
ccacgcttacacttcttcatgcccggttttgccccactgaccgctagggggagtcagcag
taccgcgcccttactgtgcctgaactgacgcagcagatgttcgatgctaaaaacatgatg
gctgcgtgtgacccgcgtcacggccgctacctcaccgtggccaccgtcttccgaggtccc
atgtcaatgaaggaagtagatgagcaaatgctcgccatccagaacaaaaacagcagctac
tttgtcgagtggattcccaacaacgtcaaagtggccgtgtgtgacatcccacccagggga
ctcaagatggcctcgactttcatcggcaacagcacggccatccaggagatcttcaagcgc
atctctgagcagttctctgccatgtttaaacgaaaagcttttctgcactggttcaccgga
gaaggaatggatgagatggagtttacggaggctgagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaagaggccacggccaacgacggcgaagatgctttcgacgaggac
gaggaggaagtcaacgagtga
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