Clarias gariepinus (North African catfish): 128519904
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Entry
128519904 CDS
T10780
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00900
Terpenoid backbone biosynthesis
cgar01100
Metabolic pathways
Module
cgar_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
128519904 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cgar01006
]
128519904 (fdps)
Enzymes [BR:
cgar01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
128519904 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
128519904 (fdps)
Prenyltransferases [BR:
cgar01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
128519904 (fdps)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
128519904
NCBI-ProteinID:
XP_053349836
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All DBs
Position
4:14467704..14474398
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AA seq
354 aa
AA seq
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MGDISCGKAAHLSDPQHFDRYFEKLLCELTEQDFTDPVLADALKRLREVLQYNATGGKRN
RGLSVIGSLRELVPPSKLAPEEVERALLVGWCIELLQAFFLVADDIMDASVTRRGQPCWY
KKEGIGLDAINDAFLLEGSIYRLLRRHCRQQPYYVHLLELFTETSFQTELGQALDLMTAP
PHKIDLNRFSMDRYKAIVKYKTAFYSFYLPVAAAMYMAGIDSEVEHLNAKHILLEMGEFF
QIQDDYLDCYGDPAVTGKIGTDIQDNKCSWLVVTALKVMTPEQRVELETCYGRSDVESVE
RVKALYDTLEMPVRYHQYEEESYLRLQNLIQCYAQNLPHAVFLNFAKKIYKRNK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgggagacatcagttgcggtaaagctgcccacttgtcagacccacagcattttgacaga
tactttgagaagctgctgtgtgagttgacagagcaggacttcacagacccggtgcttgct
gatgctctcaaaagactgagagaggtgctgcagtacaatgccacaggaggcaagaggaac
cgtggcttgtctgtgattggctcattacgagagttggtcccgccctccaagctggcacct
gaagaagtggagcgtgccttgttggtcggatggtgcattgaattgctgcaagctttcttc
ttggtagccgatgatataatggatgcatcagtaacacggagaggtcagccatgctggtat
aaaaaggaaggcattggcctggatgctattaatgatgcttttctgctggagggttccatc
tatcgccttctgcgcaggcattgcagacagcagccttactacgtccatttgttggagctt
tttactgagacatcattccagacagagctggggcaagctctcgatctgatgactgccccc
ccacacaagatcgacttaaaccgcttttccatggacaggtataaagccatagtgaaatac
aaaactgcattctactctttttatcttccagtggctgcagccatgtacatggcaggaatc
gacagcgaagtggaacatctcaatgctaaacacattttgctcgaaatgggggagttcttt
cagatacaggatgattatttggattgctatggagaccctgcagtaacaggaaagattggc
actgatatccaggacaataagtgcagctggcttgtggtgacagcactaaaggtgatgacc
cctgagcagagagtggagctagagacatgttatgggcggagtgatgtggagagtgtagag
cgagtgaaggcactgtacgacactttggaaatgcctgtccgataccaccagtacgaggaa
gaaagctacctgcgactgcaaaacctcatccagtgttatgctcaaaaccttccccatgca
gtttttctaaactttgcaaagaaaatctataaaagaaacaaatga
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