Clarias gariepinus (North African catfish): 128519954
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Entry
128519954 CDS
T10780
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128519954 (ptprub)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128519954 (ptprub)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
128519954 (ptprub)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
128519954 (ptprub)
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
Type II RPTP family
128519954 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
Ig_DSCAM-DSCAML_C
PTPlike_phytase
Y_phosphatase3
Pur_ac_phosph_N
ig
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
128519954
NCBI-ProteinID:
XP_053349915
LinkDB
All DBs
Position
4:24551023..24780909
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AA seq
1465 aa
AA seq
DB search
MICACFPNWTKKMKACAIVLILAVHIRADSVEGPTAAGCTFDEDSDPSLCEFSQGEEDDF
DWQLFRTHTMPQVTPDLLHGSYMIVNSSQHAAGQRAQLLLQTLSENDTHCVQFSYFLYSR
DGHSPGALRAYVRVNGGPLGMAVWNVSGSQGRQWFQVELAVSTFWPNEYQVLLEATVDRW
GYIAVDNILLLNYPCYKAPHFSRLGDVEVNAGQNATFQCVAAGRASEAEKFLLERHNGEV
SLGGSVKHLGRNRFSVSFQLEDVQRPEQDLYRCVTQSSRGSGVSNFAELIVKVPPSPIAP
PQLLRAGSTYLIIQLNTNSILGDGPIIRREIEYRASHAPWSEINGVNMLTYKLWHLDPDT
EYHISVLLTRPGEGGTGPPGPPLISRTKCAEPMRALRDLRASEIQARQITLQWEPLAFNL
TRCHTYSVSLCYRYAIAGGTGGAGHNTTIRECLAVERNTSRFTLRDLPPYHIIHVRLALA
NTEGKKEGKEVVFQTEEDIPGGIAPESLTFTPLDDMVFLKWEEPVEPNGIITQYEISYQS
IESSDPGINVPGPRRTVSKLRNETYHMFSNLHPGTTYLISVRARTAKGFGQTALTEITTN
ISAPTFDYADIPSPLSETENTITVLLRPAQGRGAPVSTYQVVVEEESGRKLKRELGMQEC
FPVPTSHGEAQARGAPHYYTAELPPSSLAEATPFTVGDNHTYNGYWNSPLDPRKNYLIYF
QAMSNFRGETRINCIRIARKAACKDLRRPLEVTQHSEEMGLILGICAGGLVVLILLLGAI
IIIIKKGRDYYSYSYYPRKPVNMNKTPITYRQEKSHMMGSMERSFADQSTLQEDERMALS
FMDAHTCSTRSDPRSSMNESSSLLGGSPRRHCGSKGSPYHTGQLHPAVRVADLLQHINQM
KTAEGYGFKQEYESFFEGWDVTKKKDKTKGRHDTLMDYDRHRVKLHPLLGDPNSDYINAN
YIDIRINREGYHRSNHFIATQGPKQETVYDFWRMVWQENCFSIVMITKLVEVGRVKCYKY
WPDDTEMYGDIKISLLKTETLAEYAVRTFSLERRGYSAKHEVQQFHFMSWPEHGVPYHAT
GLLAFIRRVKTSTPPDAGPVVVHCSMGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLC
SRRINMIQTEEQYIFIHDAILEACLCGETAIPVNEFALTYKELLRVDSQSNSSQLREEFQ
TLNSVTPHLDVEECSIALLPRNREKNRSMDVLPPDRALAFLVTTEGESNNYINAALTDSF
HRPAAFIVTPHPLPGTTTDFWRLVFDYGCTSIIMLNQLNQSNSAWPCVQYWPEPGLQQYG
PMQVEFLSMSADEDIITRLFRVTNVSRLQEGHLVVCQFQFLRWSAYRDVPDSKKAFLNLL
AHVQKWQRECGDGRTVVHCLNGGGRSGTFCACTILMEMIQYQSMVDVFYSAKTLRNAKPN
MVESLEQYRFCYDLVMEYLECMDLR
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgatctgcgcctgtttcccgaactggactaaaaaaatgaaggcgtgtgcgatcgtcctg
attctggccgtgcacattcgcgccgacagcgtagagggaccgacagcagcaggctgtaca
tttgatgaggactctgaccccagcctgtgcgagttcagccagggagaggaggatgatttt
gattggcagctcttccgcacccacaccatgcctcaggtcacccctgatcttcttcatggc
tcctacatgatagtaaactcatcccagcatgccgcgggccagagagctcagctactgctt
cagacgctcagcgagaatgacacgcactgcgtccagttcagctacttcctgtatagccgg
gatggacacagccctggggctctgcgtgcatacgtgcgggtgaacggcgggccactgggc
atggctgtgtggaacgtttcaggctctcaggggcgccagtggtttcaggtggagctggca
gtcagcacattttggcccaatgagtatcaggtattgctggaggccaccgtggaccgttgg
ggctatattgctgtggacaatatcttgctgctgaactatccctgctataaagccccccat
ttctctcgcctgggggatgtggaggtcaacgctggacagaacgccaccttccagtgtgtg
gcagcaggaagagcatcggaggcagagaagtttttactggagcgacacaatggtgaggtg
tccttaggtggctcggttaagcacctgggccgcaatcgtttctcggtgtccttccagctg
gaggacgtccagaggcctgagcaggacctctaccgctgtgtcactcagtcgtccagaggc
tctggtgtttctaactttgctgaacttattgtcaaagtgcccccctctcccattgctcca
ccccagctgctaagagcaggatccacatatttgatcatccaactcaataccaactccatt
ctgggtgacgggcccatcattcgcagagagatcgagtaccgagcaagccatgcgccatgg
tccgagatcaatggagtgaacatgctcacctacaagctctggcacctggatccagacact
gagtaccacattagtgtactcctcacccggcctggagaaggtggaactggaccccccgga
ccccctcttatcagcagaactaaatgtgctgagcccatgcgagcactgcgtgacctgagg
gcttcagagattcaagctcggcagatcaccctgcagtgggaacctctggcctttaacctc
acacgctgccacacctattctgtctcgctgtgttaccgctatgccatcgcagggggcacc
ggtggtgctgggcacaacaccaccatcagagaatgtctagcagtggagcgtaacacatca
cggttcaccctccgagatctgccaccctaccacatcattcacgttcgacttgcccttgcc
aacactgaaggcaaaaaggaagggaaagaggtcgtgttccagactgaggaagacattcct
ggtggaatcgctccagagtctctaaccttcaccccgttggatgatatggtctttttaaag
tgggaggagccagtggagcccaatggtatcattactcagtatgagattagctaccagagc
attgagtcatctgaccctggcattaatgtaccaggcccacggcgcactgtgtccaagctg
aggaatgaaacataccacatgttctccaacctacatccaggtaccacttacctcatctcg
gtacgggcacgaactgccaaaggttttggccagacagctctcacagagatcaccaccaac
atttcagcacccacctttgattatgcagacataccatctccactgagtgagacagaaaac
accatcaccgtgttgctgcgtcctgcccaaggccgtggtgccccagtcagtacgtatcag
gtagttgtggaggaggagagtgggaggaagttgaagagagagctgggaatgcaggaatgt
tttcctgttcccacctctcatggtgaagcacaggcacgtggcgctccacactactacaca
gccgaactgccccccagcagcctggccgaggccacaccctttactgtgggggacaaccat
acctacaatggctactggaacagccccctagaccccaggaaaaactacctcatctacttt
caggccatgagcaattttcgaggggaaacaaggataaactgcatccgaatcgcccgtaaa
gcggcctgtaaggaccttcgacggcctctggaggtgacgcagcactcggaggagatgggg
cttattctaggaatctgtgcaggggggttggtggtcctcattctgttactgggagccatc
atcatcatcattaagaaaggaagggactactactcttactcttactatcctaggaaaccg
gtgaacatgaataagactcccattacatacaggcaggagaagagtcatatgatgggctca
atggagcgcagctttgcagaccagagcaccctgcaggaggatgagagaatggctctgtcc
tttatggatgcccacacctgcagtacccggagtgatccacgcagctccatgaatgagtca
agcagcctgctgggtggatctcctcggaggcattgtggaagtaaaggttctccgtatcac
accgggcagctccaccctgctgtacgtgtcgctgatctgctgcaacacatcaaccagatg
aagacggcagagggctacggattcaagcaggagtatgaaagtttttttgaaggctgggac
gtcactaagaagaaggataaaacaaagggaagacatgatactctaatggattatgaccgt
caccgtgtgaagctgcacccactccttggggatccgaactctgactacatcaatgccaat
tacattgatattcggataaacagggaaggctaccatcgatccaaccactttatcgccaca
cagggacccaagcaggagacagtgtacgatttctggaggatggtgtggcaggagaactgc
ttcagcatcgttatgattaccaaactcgtggaggtgggcagggttaagtgctataagtac
tggcctgatgacacagagatgtatggagacatcaaaattagcctgctgaagacagaaact
ctggctgaatatgcagtacgcaccttctccttagagaggaggggttactctgccaagcat
gaggtgcagcagtttcacttcatgtcatggccagaacacggagttccataccatgccacg
ggcttgctggccttcatccgccgtgtcaaaacctcgacaccacctgatgctggccctgtg
gtggtccactgcagtatgggggccggtaggacaggctgctacattgtgctggatgtcatg
ttagacatggcagagtgtgagggagtggtggacatctacaactgtgtgaaaactctctgt
tctcgccgcatcaacatgatccaaacagaggaacagtatatatttattcatgatgccatc
ctggaagcatgcctgtgtggagaaacagctattccggtgaacgagtttgcactcacatat
aaggagttactaagggttgactcccagagcaactcctcacagctccgtgaagagttccag
acgctgaactctgtgacacctcacctggatgtggaggagtgcagcatcgcactgttacca
cggaaccgtgagaagaatcgcagcatggatgttttgcctccagaccgcgctctcgctttc
ctggttactacagagggcgagagtaacaactacatcaacgctgctctcactgacagcttc
catcggccggcagccttcatagtgacacctcatcctctacctggcacaaccactgacttt
tggaggttggtgtttgactatggatgcacctccatcatcatgctcaaccaactcaaccag
tcaaactcagcctggccttgtgtgcagtattggcctgaacctggtctccagcagtatggc
cccatgcaggtggagtttctctccatgtctgctgatgaagatataatcacacggctgttc
cgggttacaaatgtttcacggctacaggagggtcatctggtggtgtgccagttccagttc
ctgcgttggtcagcgtatcgtgatgttcccgactccaagaaggccttccttaacctgcta
gcccatgtgcagaagtggcaaagagaatgtggcgatggtcggactgtggtccactgcctt
aatggaggtgggcgcagtggcacgttttgtgcatgcactattctgatggagatgatccag
tatcagagtatggtggatgtcttctattctgccaagaccttgaggaatgcgaaacccaat
atggtggagtcactggagcagtaccgcttttgttatgacctggtgatggaatatttggag
tgcatggacctcagatag
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integrated database retrieval system
