Clarias gariepinus (North African catfish): 128519965
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Entry
128519965 CDS
T10780
Symbol
setd2
Name
(RefSeq) histone-lysine N-methyltransferase SETD2 isoform X1
KO
K11423
[histone H3]-lysine36 N-trimethyltransferase [EC:
2.1.1.359
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00310
Lysine degradation
cgar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128519965 (setd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128519965 (setd2)
Enzymes [BR:
cgar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.359 [histone H3]-lysine36 N-trimethyltransferase
128519965 (setd2)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128519965 (setd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRI
SET
WW
AWS
Motif
Other DBs
NCBI-GeneID:
128519965
NCBI-ProteinID:
XP_053349936
LinkDB
All DBs
Position
4:15190833..15216505
Genome browser
AA seq
2692 aa
AA seq
DB search
MDALLNPELRNRDSSDQATFFQSSTVQFWEKTLDGSIKVENTAKQVIFKGLAPRVVLTNH
LLAKGPKTKVNLEEQGRPKVSFSFTSKNPRPRKPAVFVPPCPEKAASEVPPAVQSTCLPS
ADLTGQKTESKNEQVCTSIVAMVVAESQGTPAPVPLTSKLKHDKMHFKKQILSASVVEHP
TVSTVLNDTTAEAEVLIRSSARIESESSAALFQHKSVTDCSEKGSSEESTQEKSETRLKG
PTDYSHIGKESEDSISEPEHSKSVQKTENTLPGSDCDGESVRVASNQKSSDSKNMAKCDS
QNAVVKKSLSSKSEVSDKPRSDKREEKDEKGSSRSKSERDSRYASSRSSRSDRRRTKSRS
RSRSRSSRTSSSYARSDRSRNERQSRSDRSHYHDSERRLHRSSHERRRSRSRGDGRSRDS
SDSEDDLRKPRTRGSDSSRSSTYSSSQRDSKTSSHSKSYRDSKSDSKSSPHSSESDKRTQ
YSRTERFVRTSGSESSKRNSPETEASHKKSSSYSKSEVHSKTSNSNSSSRSEKKVQKNSG
SSDSDDEHKAKTRIQGSDRSTRSSVKKSNNPETKSNSTTGTDGHLEAKVNINSKLPHLGS
DKVRSHGEFTKLAVCSEHEESMQSKLTDTSSQQKQQVILNDNLKNYIEDQVVSKESAVTE
TCLNVSELHINKCHITLNDISLEDDPLGRPTDILIQNKLQILKEAQDNLANVGTLLKMND
SSILNEPPYLGYTASQDSLGSLADTLSVKELPPGECLKPNTKFVSQALLSNDVGSLSVNI
ETPQNVTEQSDLKPEETNAAVIKQKAHAKRSRWDIVGQDTSENLTPQKPVTIDTTSVKKV
ISVKKIELNSEEKCSKKEESMVCLLQPEKDMQTDKATTDSEKAIKQDPKQQFPAEAQKSN
VECSDLKADKSLATEVHLKPNCTPDAVIHIDQKYANPEKSNIYKPSIQESVPFNCDGKSH
SEESESDDSDSDSDDGRVSLKRLHSVVVVPKNSTIILETTELPAPPASPSVPSAQLTYQA
EESSLSINSEILNNLNAPMIPVKSSPEGGEHDLLAVGENKCMPSVRTPYQSQSDLVDSTS
QSEATTTLAHADQNCTVKERLKTRGSNEQVSTYAQREAESGCYQYHDNPDSWFGRKGERK
EFGEFSCPDNLRPQNSLNRVCEVTETEQPSSTFQQPDSSHSTQRPFQVERPFPRQDIGYW
TQTTVSDESMPVNTPVPSLCHESVYQIHPDSLTNDHEEYYEGKAYERHAGEILPFRKPPA
SSAFVQTNEISSNCSLVTATTESHIIFEPPRESSQKPHRGRGPPKKRRPELESESDNEAE
AGLACKRECIEERERCKDAKETKISSQQDEQRLPLLSLKDFVDPAVWREKSKHKKMPPYF
DLIEENLYLTERKKNKSHRDIKRMQCECAVLSREERARGVMACGEDCLNRLLMIECSSRC
LNGVYCSNRRFQMKQHADFEVILTESKGWGLRAAKDLQPNTFVLEYCGEVLDHREFKSRV
KEYARSKNVHYYFMALKNNEIIDATLKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTT
KAVKAGTELTFDYQFQRYGKEAQKCYCGAPSCRGFLGGENRVSVRAAVGKKQRERPRKKD
AVSALTTVDEELEALLENGEGLSDEKQVISLCRLMVRVETMEQRLTCLKLIQNTPNPSCL
KQFLDHHGLSLLWIFMVDLSEAKSNSVNNIKLQMEIMKALAVLPISTKNMLEESRVLQYI
QRWAQSHPLGQPTEQDGYSSESTSRAHTPLNTPDGPPAKMAPELDGDTPKRAVYRRLKII
SENSLDSALSDGSKVSDGKEEEDEEEEEVEVEPPQEVTVEMAEKSETSEEISVTPETVVK
QEASDAMESSQEKEEVKEGDVEQEKTVAQETDEKPTSKTDENIPAVMEESCQSEPAEIEN
QMQTPAVDQPDNAPSVKADEDANPPVYPTEESTPSSESSSENDHAESSITNVTGPTAISG
TPAESLDVNVSSESAINPEASPLNLDSIPASSATSSSEKTSAEVSAVTVESNASASAVST
AEVLPLGVVPTEGTVVGTPSQDEEEAVSDVESERSQEPQIGAADISEMAARLLDSWKDLK
EVYRIPKKSQVEKESNDRSRDREAMLTPRTSSSSRERERERERERDWDRERDWDREKDSD
RSLLRSAERRRRRGSASPPYPSPYERSSRRNEDRYDSASSSKKPRTKEVRTKLSTEERRK
LFEQEVAQREAQKQQQQQQQQQQQQQQQQQQQQQQQQQQLQRLAFNPLVYPSSPSFMAYP
PGYPIQTYVDPTNPNAGKVLLPTPPIDPMCVTQASTVPFDQTTQQPLISDLTLAAQSPNN
TQASSATSLAHVPATLELTASAQPQQFVQPAAPAQDAGVTVLSVPAQTAGAQVQGQQGYA
TLWDPNTQQAVTVQPAQQYTNTAQPQTAIYYQGQPCQTIYSIPTGYPQTNTPVIQTYTEP
AAGYLHGQQVYAGHQQGVVVQQGGTVTTIVTSQTVQQEMIVPNSIMDLPPPSPPKPKTIV
LPPGWKVARDPEGKIYYYHIVTRQTQWDPPSWDGVGEEASVEHEAEMDLGTPTYDENPSK
FSTKTAEADTSSELAKKSKEVFRKEMSQFIVQCLNPYRKPDCKLGRISNTEDFKHLARKL
THGVMNKELKSCKNPEDLECNENVKHKTKEYIKKYMQKFGAVYRPKEDTEID
NT seq
8079 nt
NT seq
+upstream
nt +downstream
nt
atggatgcactgctgaatcctgaactcagaaatcgagactcatcagaccaggcaactttt
ttccagtcttcaacagtccaattttgggaaaagacgctcgatggttcgatcaaggttgaa
aacacagcaaaacaagtcatatttaagggccttgctcccagagttgttttaacaaaccat
ctcttggctaaaggaccaaagactaaagtgaaccttgaggaacagggtcgaccgaaggtc
tctttcagcttcacgtctaaaaatcctcgcccgagaaaacccgcggtttttgttccaccc
tgtccggagaaagctgcaagcgaagttcctcctgcagtgcagtctacatgtttgccctcc
gcagacctgactgggcagaaaactgaaagcaaaaatgagcaagtttgtacctctattgtg
gccatggttgtggcagagtcccaaggaacaccggccccggtacccctcacctccaagttg
aaacacgacaagatgcattttaaaaaacagattttgagtgcgtctgttgttgaacatccc
actgtcagtactgttttaaatgataccaccgcagaggccgaggttttaattagatcttca
gcaagaatagaaagtgaatcctctgcggctctattccaacacaagtctgtcactgactgt
tctgaaaaaggtagcagtgaggaaagcactcaggagaaatcggaaactcgccttaaagga
ccaacggattactcccatattgggaaagagagtgaggatagtatttctgagcctgaacac
agcaaaagtgtccagaagacggagaatactctgcctggctccgactgtgatggtgagtct
gtccgggtagcttctaaccaaaagtctagtgactccaagaatatggcaaagtgtgatagt
cagaatgctgttgttaagaagtcattaagctccaaaagtgaagtctcagacaaacccaga
tctgataagagagaggagaaggatgaaaaagggtctagtcgaagcaaatcagaaagagat
agtagatatgcatcctcacgatcttctcgttctgaccgaaggaggaccaagagtcggtca
cggtctagatcgcgaagttctcgaacaagttcttcctacgccagatcagatagatcaaga
aatgaaagacagtcgagatcagatcggtcacactaccacgattctgaaaggagattgcac
agaagttcacatgaacggaggaggtcccgctcccgaggtgacggcagatctcgggacagc
tcagactccgaagatgacctcaggaagcccaggactcgaggcagcgattcgagccgatcc
tccacatattctagctcgcaaagagattcaaaaacgtcctctcattcgaaatcctacaga
gactcaaaatctgactcaaaatcttctcctcattcgtcagaatcagacaaaagaacacaa
tactcaagaacagagaggtttgttagaactagcggctctgaaagtagtaaaaggaactct
ccagagaccgaagctagtcataaaaagtccagttcctattcaaaatcagaggtacatagt
aaaacctcaaattcgaatagcagttcaagatctgaaaaaaaggtccaaaaaaacagtggg
agttctgactctgacgacgagcacaaagcaaaaactcgaattcaaggctcagaccggtct
actaggtcgtctgttaaaaaatctaataatccagagacaaaatcaaatagtactactgga
acagatggacacttagaagcaaaagtaaatattaattctaaacttcctcatttgggttct
gacaaagtcaggtctcacggagaattcaccaagctggctgtttgttccgaacatgaagaa
agcatgcagtctaaactaacagatacttcttcccaacaaaagcagcaagttatcctaaac
gacaatttaaaaaattacatcgaagatcaagttgtaagcaaagaatctgctgttacagaa
acgtgtctgaacgtcagtgaattgcatattaataaatgtcacattactctgaatgacatt
tctttagaggacgatccgctaggaagaccgacagacattctaattcaaaataaattacaa
atcttgaaagaggcgcaggataatttagcaaatgttggtacccttttaaaaatgaacgat
tcttctatcttgaatgagccgccctacctaggctacaccgccagtcaggattcattaggt
tcattagcagacactctttctgtgaaagaattaccacctggagaatgcttgaaacctaac
actaaatttgtttcccaggctcttctcagtaacgacgtcggtagcctatctgtgaatatc
gaaacccctcaaaatgttactgagcagtcagacctgaaacctgaagagactaatgctgca
gttataaaacaaaaggcacatgctaaaaggtcacggtgggacattgttggtcaggacact
tcagaaaatctgaccccacaaaaaccggtaactattgacacaacttctgtgaaaaaagta
atttcagttaagaaaatagaattaaacagtgaagaaaaatgctcaaagaaagaggaatct
atggtgtgtttacttcagcctgagaaggacatgcagacagacaaggcaacaacagattcc
gagaaagcaatcaagcaagatcctaaacagcagtttcctgctgaggcacagaaaagcaat
gttgaatgtagtgatcttaaagctgacaagtccctcgcgaccgaagttcatctgaaacct
aattgcactcccgatgctgttattcatatcgatcagaaatatgcaaaccctgaaaaatcg
aacatttacaagccttcgattcaagagtctgtgccgtttaactgtgacggtaaaagccac
agtgaggaaagtgaatcggacgactctgactccgattcagatgatggacgagtctccttg
aagaggcttcactctgtggtggttgtgccaaagaattctactattatcctcgagacaact
gaactgccagccccaccagcaagcccatcggttcccagtgcgcagctaacgtatcaggca
gaagaatcgagtctaagcattaacagtgaaattcttaataatctcaatgctccaatgata
cctgtgaaaagttcaccagaaggtggcgaacacgatctcttggcagttggtgagaataaa
tgtatgccttctgtacgaacgccctaccagtcccagagcgacttggttgatagcactagc
cagtctgaggcaaccacaacactggctcacgcagaccagaactgcactgtcaaagaacgg
ctgaagactcgtggctctaatgaacaagtttctacctatgctcagagggaggctgaatca
ggttgttatcaatatcatgacaatccagacagctggttcggaagaaagggagaaagaaag
gaattcggggaatttagttgcccggataatctcagaccacagaacagtttgaaccgggtt
tgtgaagtcaccgaaacagagcagcccagcagcacatttcagcagccagacagcagtcac
agcactcaacggccattccaggtagaacgaccatttcccaggcaagatattggctactgg
actcagacgacagtctctgatgagagcatgccagtcaatacacctgtgccttctctttgt
cacgagtcagtgtaccagattcaccccgactctttaactaatgaccatgaagaatattat
gagggaaaagcatacgaaaggcatgccggtgagattctgccatttaggaaacctccagca
tcatctgcattcgtccaaacaaatgagataagcagcaattgcagccttgtaactgccact
actgagagtcatatcatcttcgagcctccaagggaaagcagccaaaagcctcatagagga
agaggtccacccaagaaaagacgtccagagctcgagtcagaatcagacaacgaggcagag
gctggccttgcttgtaagcgagaatgcatagaggagcgtgagcggtgcaaagacgcgaaa
gaaactaagatatcttcacagcaagacgaacaacgcttgccactgcttagtctgaaagac
ttcgttgaccctgctgtctggagggaaaaatctaagcataagaaaatgcctccttatttt
gatcttattgaggaaaacctctacttgacagaacgtaagaagaataagtctcatcgggat
attaagcgaatgcagtgcgagtgtgctgtgctttcgagagaggagcgggcacggggcgtt
atggcttgtggagaagattgtttgaaccgcctgctgatgattgaatgctcgtcgcggtgc
ttaaatggcgtctactgctcaaatcggcgctttcaaatgaagcagcatgcagattttgaa
gtaatcctcactgagagcaaaggctggggtttgcgggctgcgaaagacttacagccgaac
acgtttgttttggagtattgcggtgaggttctggatcacagggagttcaagtcgcgggtg
aaagagtatgctcgcagcaagaatgtccactactacttcatggccttaaagaataacgag
atcattgatgctacactgaaaggcaactgctcacgatttatgaaccacagctgtgagccc
aactgtgaaactcagaagtggacggtgaacggtcagctaagagttggcttctttacaacc
aaagctgtgaaagcggggacagagctcacatttgattaccagttccaaagatacgggaaa
gaggcacaaaagtgttactgtggagcaccgagttgccggggcttcctgggcggagagaat
cgtgtcagcgtacgggcagcagtgggcaagaagcaaagggagcgccctcgaaagaaagac
gctgtcagcgccttgactacagtggatgaagagctggaggctctgctagaaaacggggaa
ggtctgagtgatgagaaacaagttatttcactctgcagattaatggtgcgtgtggagacg
atggagcagagactcacttgtttgaaacttatccagaatactccaaatccttcatgcctc
aagcagtttttggatcatcacggcctctcgttgttgtggatattcatggttgatctctct
gaagccaaaagcaactctgttaataacatcaaactacagatggagataatgaaggcattg
gcagttctgcccatttctactaagaatatgctggaagagagccgtgtgctgcagtacatc
cagcgctgggcacagagccatccacttggccagcctacagagcaagacggttactccagc
gagagcacctcccgagcccacacacctctcaacacaccagacggtccccctgccaaaatg
gccccagagctggatggagacacaccaaaacgtgcagtctaccgcaggctgaagatcatc
agtgagaacagcctggatagtgccctctcagacggaagcaaagtctctgacggtaaagag
gaagaagacgaagaagaggaggaggtggaggttgagcccccgcaggaggtcacagtggaa
atggcagagaaaagtgagaccagtgaggaaatcagtgtgaccccagagacagtagtaaaa
caagaggcttcagacgctatggagagtagtcaggaaaaagaggaggtaaaggagggggac
gttgaacaggagaaaacagtagcacaggaaactgatgagaagccaacaagcaagaccgat
gagaacattcctgctgtcatggaggagagctgtcagtctgagcctgcagaaatagaaaat
caaatgcagacacctgctgtagatcaacctgataatgctcccagtgtcaaagctgacgaa
gacgctaatcctcctgtgtatcccaccgaggagagcactcccagttcagagtcttcttca
gagaatgaccacgcagagtcttcaatcacaaacgtcactggtcctaccgccatcagcggt
acgcctgcagaatccctagatgtcaatgtgtcttcagagtctgcaataaacccagaagct
tcacctctcaacttggacagcattccagctagttctgctaccagctcttcagagaaaaca
tcagctgaagtcagtgctgttactgtggagagcaacgcttcggcttcagctgtcagcaca
gcagaggtgctgccgctgggggtagttccgacagagggcacagtggtaggcacaccttca
caggatgaggaggaggctgtgtctgatgtggaaagtgagagaagccaagaacctcagatt
ggagcagctgatatcagtgagatggctgcccgcctactcgacagctggaaagacttgaag
gaggtgtacaggatcccaaagaagagccaggtagaaaaagagtcaaatgaccgcagtcga
gacagggaggcaatgctgacaccccgcacatcctccagcagccgtgagagagagcgagag
agggaaagagagcgggactgggaccgagaacgagactgggacagggagaaagactctgac
aggtcgttgctacgtagcgccgaaaggcggcgtaggcgaggctccgcctctcccccgtac
ccatctccctatgaaaggagcagccgtaggaatgaagaccgctatgattccgccagcagt
agtaagaaacctcgaaccaaggaggttcgtaccaagctttctacagaggagcgacggaag
ctctttgagcaggaggtggctcagcgagaagcccagaaacaacaacagcagcagcagcag
caacaacaacaacaacaacagcaacaacagcagcaacagcaacaacagcagcagcagcta
cagagactagcgttcaatcctcttgtgtatccctcaagccctagttttatggcctatcca
cctgggtaccctattcagacatatgtggacccaactaaccccaatgcgggcaaggtgcta
ttacctacgccgcccatcgatcctatgtgtgtgactcaagccagcacggttccctttgat
cagactactcagcagccactcatttctgacctgactttggcagctcagtcccccaacaac
actcaggccagctcagccacaagtctggcacatgtgcctgctacactggagctgacagct
tctgctcagccgcagcagtttgtccagccagccgcgccagctcaggacgctggcgtcact
gtcctgtcggttcctgctcagacggctggtgcccaagtgcagggtcagcagggttatgca
acactttgggatcccaatacacaacaggcagtaacagtgcagcctgctcagcagtacaca
aacacagcccagcctcagactgccatctattaccaaggccagccatgccagacaatctac
agcattcccacaggttatcctcagaccaacactcccgtcattcagacatacactgagcca
gctgctggctatctacatgggcagcaggtctatgctggtcaccagcagggagtcgtggtc
cagcaaggtggcacagtaaccaccatagtcacatctcaaactgtccagcaggaaatgatt
gtgcccaacagtatcatggacctgccgcctccttcacctccaaaacctaaaaccattgtc
ctgccccctggctggaaggtagcacgcgatcctgagggcaagatctactactatcatata
gtcaccaggcaaacccagtgggatcctcctagctgggacggagttggggaagaggccagt
gtagagcacgaggctgaaatggacttgggaacaccaacttatgatgaaaatccctctaag
ttctccaccaagacagctgaggcagacacctccagtgagcttgcgaagaaaagcaaagag
gtcttccgcaaagagatgtcacagtttattgtacaatgccttaatccataccgaaagcct
gactgcaaactgggtcgcattagcaacactgaagatttcaaacacctcgccaggaagttg
actcacggagtgatgaacaaagagcttaaatcctgcaaaaacccagaggacctggagtgc
aacgagaacgttaaacacaagacaaaggaatacattaagaaatacatgcagaagttcgga
gctgtttaccggcccaaagaggacaccgagatagactag
DBGET
integrated database retrieval system
