Clarias gariepinus (North African catfish): 128519977
Help
Entry
128519977 CDS
T10780
Name
(RefSeq) uncharacterized protein LOC128519977 isoform X1
Organism
cgar Clarias gariepinus (North African catfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
adh_short
PKS_DH_N
CurL-like_PKS_C
adh_short_C2
PP-binding
ACP_SdgA_C
Thiolase_N
ADH_N
RhiE-like_linker
Motif
Other DBs
NCBI-GeneID:
128519977
NCBI-ProteinID:
XP_053349953
LinkDB
All DBs
Position
4
Genome browser
AA seq
2113 aa
AA seq
DB search
MILVLLDYCQLPFIMKDKDSEIAIVGIGCNFPGGEGLDNFWNVLLEGKNCAVPIPFERFD
QNEWCDQDDNKAGKSRTAKAAFADGFNEIDQRFFGITDAEMEQMDPQHKMLLQCTYRALE
NAGMPMEKASGSKTGVFLGLMNRDYELTMANVNPVIINHCTGTGIAMSIAANRISYAFNF
TGPSLSIDCACSSSLVALHLACQAMRQGDCEMAVFGGVNCIFQPRVFVALSKAKMISPDG
TSKPFSNTADGYGRGEGCGVILLKSLKKALQDNDHIWGIVCKTAVNQDGRTVTPITKPSM
VQQEELLNTIYSTGTYLSDIQYVEAHGTGTPVGDSVEAGSISKVIAKARPSELGPLPIGS
VKSNIGHTESAAGVAGLIKVLLMMKHETIVPSVFYSEESSSIDVQALNLKIPTKAEKWVT
SRGSVRVAGINNFGFGGTNAHAVVKQYLKTKSPKEAVKKQHNFFILSAASEKSLANMVKD
TVENISANNISDLQSLVYTSGCRRSHWKHRYRKAFHASSLTDLKEKLMYVQDKKIVLAKK
LPRLVFVFCGNGVTYKGMCKQLLKEESIFREKVREIDDLFQRYFKIGLVEILEGESEPEV
GFSAPEIVQPLLFAVQVAIANLLMQWGIRPDAVLGHSVGEVAAAHCSGLLSLEDAVKVIY
YRSSLQSRVTGGKMLVVSNMPVSDVLKRLPSYSGRICLAAQNSPQSCTLSGEEDAIDNLH
KSLSNSNEGKNLFLHVLDVPAAYHSHMMDPIVGEVENSIGQLHAQNLHTELFSTVSGDKV
CPTDFVNGKYWARNIREPVAFEQALKSVKLTKNEIFVEIGPRRALQRNIIETLGNDTVVL
SSVQPDKDVETMLTVVSKLFEMGINVDWDQFYKGSEMEPIIFPRYQFDSVRKDVLTEANL
SGDSSVHPVITQLSKNGLDFSCDLSSEALSYLYEHKHQGVAIVPGAFYVELGLAATMTSI
KPKMPLSSLQLSIKFHSPCILSENIPDVKVRLDSTKSTAGHSFQFKVHSSSVSYASGKVE
STQVRLPEEPYISLNCVSERCQSVVSSEEFYKNLALGGFQYGPIFKNKGNVYYGEELAEA
YSIVTVPDEILPQLHEYYIHPVVLDYLMQLVPVTGTYHFLGRPGFPSQIGSLTVFEPLQK
EMVVYLRATHMGNEELIICGCFADKDGRVLVELKNVVITYLGNRSRVVEEYFFHNSYSVV
SEPDNFSTPTSLVFADELGISKGLQQYLDPKSKYISSTHAKVLTEHGFEAFLSDLNIQKV
DTNFQEVLFMWGAADLHKTENVLDCMASCCENFRVIIAGLKLMHFPNSIRVVTYRSSEGA
VDHISSGFVLSGMTRACAAELSDLSFQLIDIDSSNDLKALAKIIRSFPCSKYPELVIKNG
QILKPQIIHTPMSDISDQNIEKSQCESFILQTSDPYKATGLSAVVSEECPEPIQKKNVET
QLCKVCVHSSDYFPVSVSDLKFGQTLYWNKHTSQNHKLLALDFSGTVTAVGNDVKELKVG
DHIVSCYPVAACNKVVIPADACYKTRRLKFLKDTPCVSYFILAWEILHSALPKGRHQKLG
IFSPIPDSVIVKVLTVTAVKSGWSVTVAKNTDQLCHDFNEMAAIVLLPPYDETVITKSSQ
MTSVRDIVLVADNQLNTCVSQLAFRGQNNEVHMKILFSSSLMQKQSIRAQKSHIFYWLKN
MHLDRIFGGFKNHTIQNSKIENTNCLLSESYFRCQTIPVVVLGHDAKNEPSDIPLIPEAK
KLFQKHCVYIVTGGLSGLGFQTVKFIAQRGGGNIVILSRSGASDQIEQEMNNVKNQCQCS
ITRLQCDVSVAEQVHQAVTQIGKLFPSKPIKGVFHSAVILHDGLIESLNKSHYEKVMRPK
VNGVINLHYATEHCDLDYFVCYSSISAFLGNASQTNYASANSFMDAFCQYRRNNGLPGQA
INWGALNLGLLLNQHHFQRFLESKGMMILEVSEIHDSLEQCLLINKPQQVVCRFHFKNIR
YNVLSQNKSLTQRLSALVEEELKKSKMINSKLEQTNTISSPSEYIKSLISENIHIEQDEL
SDEICLSSLGIDSMLAMTLQNLIFQDKGVSVPLVTILDPEKTISDLIKILEMENGGNEED
GNDFLPGEEMTVF
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atgattttggttttattagattactgtcagcttcctttcatcatgaaagataaggattca
gaaattgctattgttggcataggatgtaatttccctggaggtgagggacttgataatttc
tggaatgtcttgcttgagggaaagaactgtgcagtgccgataccattcgaaaggtttgac
cagaatgaatggtgtgatcaagatgacaataaggcaggaaagtcacggacagcaaaagct
gcatttgctgatggattcaatgagattgatcagagattcttcggcatcactgatgctgag
atggagcagatggacccacagcacaagatgcttctgcagtgcacttacagggcacttgag
aatgccggcatgcccatggagaaggccagtgggagcaaaacaggagtttttctgggcctg
atgaacagggactatgaactcaccatggctaatgtcaatcctgttatcattaaccactgc
actggtactggtatagccatgagtatagctgccaacagaatctcttacgccttcaacttt
actggaccttctttatccattgactgtgcctgctcttcatctcttgttgctcttcatttg
gcctgtcaagccatgagacaaggggactgtgaaatggctgtgtttggtggtgttaactgc
atttttcagccaagagtatttgtggctctaagcaaggcaaagatgatctcacctgatgga
accagcaaaccattttccaacacagcagatggctatggcagaggagaaggctgtggtgtc
atcctgctgaagtccttgaaaaaggctcttcaagacaatgaccatatatggggcatagtc
tgcaaaacagcagtaaatcaagacggccgcactgtcactccgatcacaaagccatctatg
gtccagcaggaggagctgctcaatacaatttactctacagggacctacctgtctgatatc
cagtacgtagaggctcatgggaccgggactccagtgggagattcagtagaagcaggaagc
atctctaaagtcattgccaaggcacggccctcagagttagggccgctccctattggctca
gttaagagtaacatcggacacacggaatctgcagcaggagtggcaggactgattaaggta
cttctaatgatgaagcatgaaaccattgtaccttcagtattctactcagaggaaagttct
agcatagatgttcaagctcttaatctaaagattcctaccaaagctgaaaaatgggtcact
agcagaggttcagtgagagttgctgggataaataactttgggtttggagggacgaatgca
catgcagttgtaaagcaatatcttaagacaaaatcgccaaaggaagctgtcaaaaaacag
cacaattttttcatactttctgcagcatcagagaaatcattggcaaatatggtaaaagac
actgtagagaatatcagtgcgaataatataagtgatttacaaagcctggtatatacttcc
ggctgtaggagaagtcactggaaacatagatatcggaaagcatttcacgcatcatctctg
actgatttaaaagagaaacttatgtatgttcaggacaaaaagattgtgctagcaaagaag
cttccaagactagtgtttgtgttttgtgggaatggtgttacatataaaggtatgtgcaaa
cagcttctaaaagaggaatctattttcagagagaaagtgagagagattgatgatcttttc
caaagatactttaaaattggcctagtagaaatacttgagggtgagtctgaacctgaggtt
ggtttctcagcaccagaaattgttcagcctctcttgtttgccgtacaggttgccatcgct
aatctattaatgcaatgggggattagaccagatgctgttcttggacattctgttggagaa
gtcgctgcagctcattgctctggtctgttgtcgcttgaggatgcagtaaaggtcatctac
tatcgcagtagtttgcagagcagagtaacaggagggaaaatgcttgttgtaagcaacatg
cctgtatcagatgtgttaaaacgtcttccttcttactctgggaggatttgcttagctgca
cagaacagtcctcagtcatgcacactttcaggagaagaagatgctattgataatttgcac
aagagcttgagcaattccaatgaaggtaaaaatttgttcctgcatgttttagatgtgcct
gctgcttatcatagtcacatgatggatcctattgtgggagaagtagagaatagtataggc
caactgcacgcacagaacttacacacagaattattttccacagtgtcaggagacaaggta
tgcccaactgattttgttaatggtaaatactgggcaaggaacatccgagaaccagtcgct
tttgaacaagcactaaaatcagttaaactgaccaagaatgagatatttgttgagattggc
ccaagaagggctttgcagagaaacatcattgagactcttgggaatgacactgtggtgttg
tcatcagtgcagcctgataaagatgttgagacaatgctgactgttgtatccaaattgttt
gaaatgggaatcaatgtagattgggaccagttttacaaaggctctgagatggaaccaatt
atttttccaaggtatcagtttgacagtgtgaggaaagatgtactaactgaagcaaatctc
tctggtgacagtagtgtccatcctgttattacacagttaagtaaaaatggcttagatttc
agctgtgacctctcctctgaagcattgtcctatctgtatgaacataaacaccaaggtgtt
gccatcgtccctggggcattttacgttgaattaggcttagcagccaccatgacgagtatt
aaaccaaaaatgcccctcagctctctgcagctcagtataaagtttcacagtccatgtatt
ttgtcagaaaatatacctgacgtgaaagtacgattggattcgactaaaagcacagcaggg
catagctttcagtttaaggtgcactcttcatcagtaagctatgcatcagggaaagttgag
tcaacacaggtaaggttgcccgaagagccatacatttcactgaactgtgtctctgaaaga
tgccaatctgttgtgagttctgaggagttctataagaacctagctttgggtggatttcag
tacggccccatttttaaaaataagggaaatgtatattatggagaggaacttgcagaagca
tattcaattgttactgttccagatgaaatattgccccaactacatgagtactacattcat
cctgtagtcctagactatctcatgcaacttgttcctgttacaggaacatatcatttcttg
ggaaggcctggatttccttcacaaataggcagcctaactgtgtttgaaccgttgcagaag
gaaatggttgtgtatttgagagcaacacatatgggaaatgaggaacttataatttgtggc
tgttttgctgacaaagatggcagggttctggttgaactcaagaatgtagtcattacctac
ctagggaatcgctctcgtgttgtagaggagtacttttttcacaacagttacagtgtagtg
tcagagcctgacaacttctcaacaccgacatcattggtttttgctgatgagttaggaatt
tctaaaggcctacaacaatacttggacccaaagtcaaaatacatttcctccacgcatgcc
aaagtactgacagaacatggatttgaagcttttctgtctgacctaaacatccaaaaggtc
gatacaaatttccaggaagtcttgtttatgtggggtgctgcagacttgcacaaaacagag
aatgtattagattgcatggcaagttgttgtgaaaatttccgggtaattattgcaggcctt
aagttaatgcatttcccaaactccatcagggtagttacctaccggtcatcagaaggagca
gtagaccacatcagttctggttttgtactgtctggaatgacaagagcatgtgcagctgaa
ttgtcagatctctcctttcagttaatagacattgattctagtaatgacctaaaagctttg
gctaagatcatcagatcatttccctgcagcaaatacccagagctggtcataaaaaatggc
cagattcttaagccccagattattcacacaccgatgtcagacatttcagatcaaaatatc
gaaaaatcacagtgtgaaagctttatcttgcaaacctctgatccctacaaagcaacaggc
ctttcagcagttgtttctgaagaatgccctgaacctattcaaaagaaaaatgtggagacc
cagctgtgtaaagtatgcgtgcattcatcagactatttcccagttagcgtttctgatctt
aaatttggtcagacactgtactggaacaaacacacctctcagaaccacaaacttttagca
cttgacttcagtggaactgtcacagctgtgggaaatgatgtgaaagaactgaaagtggga
gaccatatagtttcctgttaccctgttgctgcctgtaacaaagttgttattccagcagat
gcatgctacaaaacaaggaggcttaaatttctgaaggacactccctgtgtatcttacttt
atactcgcttgggagatcttacactctgcactgccaaagggcagacaccaaaaattgggt
attttctcccctatcccggactcagtcatagtgaaagtattaactgtcacagcagtcaaa
tcaggttggagtgtcactgtggccaagaacactgaccaactatgtcatgattttaatgag
atggcagcaattgtgcttctccctccgtatgatgaaactgtcattacaaaatccagtcaa
atgacaagtgttagagacattgtccttgttgctgacaaccagctaaacacctgtgtcagt
cagcttgcttttagaggtcaaaataatgaggttcatatgaaaatccttttctcatcaagc
ctaatgcaaaagcagtcaattagagcacagaaatcacacatcttttactggctaaaaaac
atgcatttggacagaatatttgggggttttaaaaaccacaccattcagaactcaaaaata
gagaacactaattgcttgctttcagaatcatacttcagatgccagaccattccagtggtg
gtcttggggcatgatgccaagaatgaaccttccgatatcccactgataccagaagccaaa
aagctgttccagaagcattgtgtttacattgtgacagggggtctgtcaggacttggattt
cagacagtgaagttcatcgctcaaaggggtggagggaatattgtgatcctgtctaggagt
ggtgcaagtgatcagatagaacaggagatgaataatgtaaaaaaccagtgtcagtgctca
atcacaagattacaatgtgacgtttcagtcgcagagcaggttcaccaagcagttactcag
atcggtaaactgtttccatccaaaccaatcaaaggagtgttccacagtgcagtaatcctc
catgatggactaattgagagcctaaacaaatcccattatgagaaagtcatgcggccaaaa
gtgaatggtgtaattaaccttcactatgctaccgagcactgtgatttggattattttgtg
tgctactcctctatctcggccttccttggcaatgcttcacaaacaaactatgcctccgcc
aactcatttatggatgccttctgccagtatcgcagaaacaatggacttcctgggcaggcg
attaactggggagctttaaatctgggtctcctgttgaaccaacaccatttccaaagattt
ctggagtcaaaaggaatgatgatcctggaagtgtcagaaattcatgatagtcttgagcag
tgtcttttgattaacaaacctcaacaggtcgtgtgcagattccatttcaagaacattaga
tataatgttctgtctcaaaacaaatccctcacccagcggttatcagcactggtagaggaa
gagctcaaaaagtctaaaatgatcaactcaaaacttgaacagactaacacaatctcttca
ccaagtgaatatatcaaatcactaataagtgaaaatattcacattgaacaagatgagctg
agtgatgagatctgtctatcatcactgggtattgattccatgctagccatgacgttgcag
aacctcatttttcaagataaaggagtgagtgtgcctctggtaacaatcctggatccggaa
aagacaatttctgacttgattaaaatactggaaatggaaaatggtggaaatgaagaggat
ggcaatgacttcctccctggtgaagagatgacagtattctag
DBGET
integrated database retrieval system
