Clarias gariepinus (North African catfish): 128519998
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Entry
128519998 CDS
T10780
Symbol
eif4a1a
Name
(RefSeq) eukaryotic translation initiation factor 4A1A
KO
K03257
translation initiation factor 4A
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128519998 (eif4a1a)
03012 Translation factors [BR:
cgar03012
]
128519998 (eif4a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128519998 (eif4a1a)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128519998 (eif4a1a)
mRNA cycle factors
Stress granule specific factors
128519998 (eif4a1a)
Translation factors [BR:
cgar03012
]
Eukaryotic type
Initiation factors
eIF-4
128519998 (eif4a1a)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128519998 (eif4a1a)
Exosomal proteins of bladder cancer cells
128519998 (eif4a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
128519998
NCBI-ProteinID:
XP_053349990
LinkDB
All DBs
Position
1:complement(32699467..32705566)
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AA seq
406 aa
AA seq
DB search
MSAQHEHRPRDNGPEGMEPDGVIEGNWKEVVDSFDDMNLRENLLRGIYAYGFEKPSAIQQ
RAILPCIKGYDVIAQAQSGTGKTATFAIAILQQIDIELKATQAMVLAPTRELAQQIQKVV
LALGDYMGATCHACIGGTNVRNEVQKLQADVPHIVVGTPGRVFDMLNRRYLSPKYIKQFA
LDEADEMLSRGFKDQIYEIFQKLSTDIQVILLSATMPQEVLDVTTKFMRDPIRILVKKEE
LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVS
ALHGDMDQKERDLIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI
GRGGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVEEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcaacatgaacatagacctagagacaatggccccgagggcatggagccagat
ggagtcattgagggcaactggaaggaagttgtcgacagctttgatgacatgaacctgcgt
gagaatcttctcaggggaatatatgcctatggttttgagaaaccctctgccattcagcag
agggcgattctcccttgtatcaaggggtatgatgtcattgctcaggctcagtcaggaaca
ggaaagacggccacgtttgccatcgccatccttcaacagattgatattgagctgaaagct
actcaagctatggtcctggccccgaccagagagcttgctcagcagatccagaaggtggtc
ctagcccttggggactatatgggtgcaacctgccatgcttgcattggtggcaccaacgtt
cgtaatgaggtgcagaagctccaggctgatgtgccccacatagtggtcggaacccctgga
cgggtctttgacatgctcaatcgacgctatctctctcccaaatacatcaagcagtttgcg
ttggatgaggctgatgagatgttgagccgagggttcaaggaccaaatctacgagattttc
cagaagctgtctactgacattcaggtgattctgttgtcagccaccatgccccaggaggtg
cttgatgtcaccaccaagttcatgcgggaccctataaggatcctggtcaaaaaagaggag
ctgaccctagagggtatccgtcagttctacattaatgtggagagagaggagtggaagttg
gacactttgtgtgatctgtacgaaacattgaccatcactcaagctgttatctttatcaac
actcgtcggaaggtggattggctgactgagaagatgcatgctagagactttacagtgtcc
gctttgcatggtgacatggaccagaaggagagagatttgatcatgaaggagttccgatct
ggctccagtcgtgtcctcatcaccactgacctcttggctcgaggcattgatgtgcagcag
gtttccctggtcatcaattatgatttgcccacaaacagagaaaattacatccacaggatt
gggcgtggtggccgttttggcagaaagggtgttgctatcaacatggtgactgaggatgac
aaacgcacactccgggacattgaaactttctacaacaccaccgtggaggaaatgcccatg
aatgtggccgacttgatctaa
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