Clarias gariepinus (North African catfish): 128520101
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Entry
128520101 CDS
T10780
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03271
Virion - Rotavirus
cgar04145
Phagosome
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04514
Cell adhesion molecules
cgar04530
Tight junction
cgar04810
Regulation of actin cytoskeleton
cgar04820
Cytoskeleton in muscle cells
cgar05100
Bacterial invasion of epithelial cells
Brite
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128520101 (itgb1a)
Exosome [BR:
cgar04147
]
Exosomal proteins
Proteins found in most exosomes
128520101 (itgb1a)
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin beta subunits
128520101 (itgb1a)
CD molecules [BR:
cgar04090
]
Proteins
128520101 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128520101
NCBI-ProteinID:
XP_053350113
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Position
4:complement(32675340..32720719)
Genome browser
AA seq
800 aa
AA seq
DB search
MDLKLLFLSALLGVICYSSAQPEGNECIKANAESCGECIQVGAKCGWCTDTDFLKQGEPT
SARCDELESLKKRGCSVSMIENPQGSLKILKDKPVTNRKIGGKKLKPEEITQIQPQKLAL
SLRSGEPQTINLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMSEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVQKLTSDGSRFNDLVGKQQI
SGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENDMYTMSHHYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLS
SNSSNVINLIIDAYNSLSSEVILENSKLPEGVTITYQSRCKNGVVSVGEDGRKCSNISIG
DEVSFSINITVNGCPKQGSPQNLKIRPLGFTEEVEIKLSFICDCDCQRKGIPNSDLCHNG
NGTFECGACRCNKDRIGRECECWKDEVSSEDLEKTCRKDNGTDLCSNNGECVCGKCECKK
RDNPEEYYSGEYCECDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDTSTCL
ASNNQICNGRGTCECGTCRCTDPKFQGPTCEICPTCPGVCTEHKACVQCRAFGTGEKKDT
CEKDCSYFKLIKVKDREELPQPVQAFPLMHCKERDANDCWFYYTYSVTNQTEVHVVETLE
CPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKINAKWDMQENPI
YKSPVNKFQNPNYGHKTAAL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaccttaaactactttttttgtcagcattgttgggagtcatatgctacagcagcgct
cagccagaagggaacgagtgcatcaaggctaatgccgaatcctgcggtgaatgcatccaa
gtaggggccaagtgtgggtggtgcacagatacagactttctgaagcagggcgagcccacg
tcggcacgctgtgatgagctcgagtccttgaagaagagaggatgttcagtgtccatgatt
gaaaaccctcaagggagcctgaaaattctcaaggacaaacctgtgaccaaccgtaagata
ggaggcaagaaactcaaacctgaggagatcacccagatacagcctcaaaaacttgccctc
agcctgagatccggagaaccacaaacaattaatctaaagtttaaaagggcagaggactac
cccattgacctgtactatcttatggacctgtcttactccatgaaggatgatctggaaaat
gtcaaaaacctgggaactagtctgatgtcagagatgtccaagatcacatcagacttcaga
attggttttggctcatttgtagagaagacggtgatgccctacatcagcaccacccctgcc
aagcttctgaacccttgcaccggggaccagaactgcaccagtcccttcagctacaagaac
gtacagaaactcaccagcgatggtagtcggttcaacgacctggtgggtaaacagcaaatc
tccggcaatctggactctccagaaggcgggttcgatgccataatgcaagtcgctgtgtgc
ggggaacacattggttggaggaacgtcactcgtttgctggtgttttctacagatgcaggt
ttccattttgctggagatggaaaactgggtggaattgtgctccctaatgatggcaaatgt
cacctagaaaacgacatgtacaccatgagccaccattatgattacccttcaatagcacat
ctggtgcagaaactgagtgaaaacaacatccagaccattttcgctgtcacagaggaattt
cagcctgtttataaagaattgaaaaacctcattccaaaatccgcagtgggaacattgtct
tcaaactccagcaacgtgatcaaccttattattgatgcctacaattctttgtcttcagag
gtgattctagagaacagcaagctgcctgaaggagtcaccatcacgtatcagtcccgctgt
aagaatggagtagtgagcgttggagaggatggacgtaaatgctccaacatctccattgga
gatgaggtctccttcagcattaacatcacagttaatggctgccccaaacaaggcagtcct
cagaatctaaagattagacctctgggcttcactgaggaagtggagattaaactgagcttt
atctgtgactgcgattgccaaaggaaaggcattccgaacagtgacctctgccataacggc
aacggcaccttcgaatgtggcgcctgcaggtgcaataaggatcgtattggccgagagtgt
gagtgctggaaagacgaggtgtccagcgaggacctggagaagacctgccgcaaggacaac
ggcaccgatctctgcagcaacaatggcgagtgtgtgtgcggcaagtgcgaatgtaagaag
agggacaacccagaggagtactacagtggcgagtactgtgagtgtgacaacttcaactgc
gaccgctccaacaacaagctctgtggaggccacggtcgctgcgaatgccgagtctgcatt
tgtgacgctaactacaccggaagtgcttgcgactgttctttggatacatcgacatgtctg
gcctccaataatcagatatgtaatggcagaggcacatgcgaatgtggaacctgcaggtgc
actgaccctaaattccaaggacccacgtgtgagatctgccctacctgccctggagtctgt
actgagcacaaggcgtgtgttcagtgccgagcctttggtactggagaaaagaaagacact
tgtgaaaaagactgcagttacttcaaactgatcaaggtgaaagacagggaggagctgcct
cagcccgtacaagccttcccactcatgcactgcaaagagagagatgctaacgactgctgg
ttctactacacctactccgtcaccaaccaaaccgaggtccatgtcgtcgagacactagaa
tgcccagctggtcctgacatcatccccatcgtggctggagtggttgcgggaatcgtcctg
attggactagcccttttgttgatctggaaactgctcatgatcattcatgaccgccgcgag
ttcgccaagtttgagaaagaaaaaattaatgccaagtgggatatgcaagagaatccaatt
tacaagagtcctgttaataagttccagaatccaaactatgggcataaaactgcagctctt
taa
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