Clarias gariepinus (North African catfish): 128520126
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Entry
128520126 CDS
T10780
Symbol
arnt
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128520126 (arnt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128520126 (arnt)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128520126 (arnt)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_3
PAS_11
HLH
PAS_9
PAS_4
Per3-like_PAS-A
bHLH_NCOA
HAUS2
QRICH1
Motif
Other DBs
NCBI-GeneID:
128520126
NCBI-ProteinID:
XP_053350151
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Position
4:3849127..3862108
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AA seq
744 aa
AA seq
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MASSNPDMSDMSPLGMAGSAGSHGSAVVPKSSNKRAAPSDFDDDDGGKLFRCDDDSGGGN
DKERFARENHSEIERRRRNKMTAYITELSEMVPTCSALARKPDKLTILRMAVSHMKTLKG
SGNTGTDGTYKPSFLTDQELKHLILEAADGFLFVVSCENGRLVYVSDSITPVLNQTQSDW
LGSSLYDQLHPDDKDKLREQLTTTENNNNNGRMLDLKTGTVKKEGSQTTVRMSMGARRSF
ICRMRCGTCPVEPISMNRLGILKSRNRSGLGPVKDGEPQFVVVHCTGYIRSWPPAGVTLS
EEEVEGGQGNRYCLVAIGRLQVTCCPSDNSLSTISVPVEFISRHNAQGTFTFVDHRCVAT
VGYQPQDLLGKNFLELAHPEDQGLLRDSLQQVVKLRGQVLSVMFRFCTKSGEWILMRTSS
FTFLNPYSEEVEYIICTNTNVNKAPNQDALSPLSSPRGALPPSLGQNSPSASSPGQIKHA
RQLQQQQQAELEGGGGGGGREEIYEAAQVSLPQVPVQPVGPDPNHSKVMASSAPPTGQQV
YTPSASFSTNARTNDSFRQAPSATQMLSHMSRQSAPSGLSVNNSSPVQTQSANPAPPASW
AQPRAPFNTQAGKSQSPQFSMGNFSSAPSSSAPSSFGQMGGASANVAANTANYSQMGPRG
HQPTNGYSDVSQAGPQFSSRPAEAAAAWQQWQNQAHTQNTAETHPHIQNSQTEMYTDVLS
MLDSSASFNNEDFTEIPMFPPFPE
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttccaacccagacatgtccgatatgtcccctctgggcatggcggggtcagct
gggtctcacggcagcgccgtcgtgccgaagagcagcaataaacgagccgccccctctgac
tttgatgacgatgatggagggaagctcttcaggtgtgacgatgactcgggcggcggtaac
gacaaggagcgattcgccagggagaaccacagcgagatcgagcggcgcaggcgcaacaag
atgaccgcctacataacggagttgtcagagatggtgcctacgtgcagcgcgttggcacgg
aaaccagacaagctcaccatcctgcgcatggccgtgtctcacatgaagacgctgaagggc
agcggcaacacggggacagacggcacatacaagccgtccttcctcaccgatcaggagctg
aagcacctgatattggaggcggcagacgggttcctctttgtggtgtcgtgtgagaacggg
cgcttggtgtacgtctcggactcgatcacgccggtgctgaaccagactcagtccgactgg
cttggttcgtctctgtacgatcagctccaccccgacgataaggacaagctgagagaacag
ctgaccaccaccgagaacaacaacaacaacggccgcatgctggatctgaagacgggcaca
gtaaagaaggagggaagccagacgacggtcagaatgagcatgggggcgcgtcgctccttc
atctgcagaatgaggtgtgggacgtgtcccgtggagccgatttccatgaacagactcggc
attctgaagagcagaaacaggagcgggttgggtcctgttaaagacggagagccgcagttc
gtggtcgtgcattgcacagggtacatccgatcctggcctcctgcaggtgttactctgtca
gaggaagaggtcgagggcggacagggcaaccgctactgtctagtcgccattggaaggctc
caggtgacatgttgccccagcgacaacagcctgagcaccatcagcgtcccggtggagttt
atttctcggcacaacgctcaggggacgttcacgttcgtggatcatcgctgcgtggctacg
gtcggctaccagcctcaggaccttctgggaaagaactttctagaactggctcatcccgag
gaccaggggctcctaagggacagcctgcagcaggtggtgaagctgcggggtcaggtgctg
tccgtgatgttccgcttctgcaccaaatcgggcgagtggatcctcatgcggacgagttcg
ttcaccttcctgaatccgtactcggaggaggtcgagtacatcatctgcaccaacactaac
gtcaataaagctccgaatcaggacgctctctcccctctgtcctcccccaggggggcgtta
cccccctctctggggcagaacagcccctcagcctccagcccggggcagataaagcacgcc
aggcagctccaacaacagcagcaggcagagttagaaggaggaggaggaggaggagggagg
gaggaaatctacgaggctgcacaggtgtctctgcctcaggttccagtgcagccagtagga
ccagatcctaatcattctaaggtcatggcctccagtgcaccccctactggacagcaggtc
tatacgccttctgcctctttcagcacaaacgcacgcaccaatgattccttcaggcaagct
ccgtctgcaacccagatgttgtcccacatgtcacgtcagagcgccccttctggtctctct
gtgaacaacagcagcccagttcagactcagagtgcaaacccggcacccccggcgtcctgg
gctcaaccacgcgctccctttaacacgcaggcaggaaaaagtcaatcaccccagttctcc
atggggaattttagctccgccccttcttcatcagcaccttcctcttttggacaaatgggt
ggcgcgtcagctaatgtagcagcaaacacggctaattactcgcaaatgggtcctcgaggc
caccagcccactaacggatacagtgatgtgagccaggcaggcccgcagttctcctcaaga
ccagcagaggcagcagcagcgtggcagcagtggcaaaatcaagcacacacacaaaacaca
gcggagacgcatcctcatatacagaacagccaaacagagatgtataccgatgttctgtcc
atgctggattcatctgcgagcttcaacaacgaagacttcacagaaatacccatgttccct
ccgtttcctgagtga
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