Clarias gariepinus (North African catfish): 128520131
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Entry
128520131 CDS
T10780
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128520131 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128520131 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128520131 (taf2)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128520131 (taf2)
Peptidases and inhibitors [BR:
cgar01002
]
Metallo peptidases
Family M1
128520131 (taf2)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128520131 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
128520131 (taf2)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128520131 (taf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
HEAT_2
Peptidase_M1
HEAT_spiro
Peptidase_M1_N
CCDC106
AP3D1
SR-25
Motif
Other DBs
NCBI-GeneID:
128520131
NCBI-ProteinID:
XP_053350163
LinkDB
All DBs
Position
4
Genome browser
AA seq
1193 aa
AA seq
DB search
MNRKKDKGFESPRPYKLTHQVVCINNINFQRKSVIGFVELTLFPTVVNLNRIKLNSKQCR
IYRVRVNELEAPFIYNDPTLEVCHHESKQRNLNYFSSAYAAAVSAVDPDAGNGELSIKVP
AELWKQGDEMKVLKVYIEFSLDQPKGGLHFVVPDMEGSMAERGAHVFSCGYQNSTRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLMETIYTHDMRKKTFHYVLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHTMSYLHEVFEFYEEILTCRYPYSCFKTVFVDE
AYMQVSSYASMSIFSTNLLHSTMIIDQTPTTRRCLAQGLAQQFFGCFISRMSWSDEWVLK
GISGYIYGLYLKKTFGVNEYRHWIREELDKIVEYELKTGGVLLHPTFAGGKEKDNPTPHL
HFSIKHPHTLSWDYYRMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLLSTSGFLKSISNVSGKDIGPLIKQWVDQSGVVKFFGSFVFNRKRNVLELEIRQD
YMSSGTQKYVGPIKVTVQELDGSFNHMLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPNMAVLRKVELAQADFMWQYQLRYERDVVAQQEAIVALEK
FPTAASRLALTDILEHEQCFYKVRMQACFCLAKIANSMVSTWQGPPAMKSLFTRMFCCKS
CPNIVKTNNFINFQSYFLQKTMPVAMALLRDVQNLCPKEVLNFILDLIKYNDNGKNKFSD
NYYRAELIGALTNSLTPAISINNEVRTVDSLNPDVKLILEEVTRFLNMEKLLPSYRNTIT
VSCLKAIRMLQKNGHIPSDPSLFKAYAEYGHFVDVRVAALEAVVDYTRVDRSAEEFQWLL
DMVQSDPVHYVRHKILSMLSKNPPFTKTAESPLCNEALVDQLWKLMNSGTSHDWRLRCDA
VNLYHTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKSDQEGPELAPEIVFTGSVKEE
HVVMEPVLGSIALTPQGLKRKAETPLASPPEPGQVLQDEPPVKMSTKSRFSMQEDEDIDM
DTVHDSRAFIYHHLNMLDRPSTPGREPPVVEQTVMPMPVTPVPTFGKEGASSSSSSKHHH
HHHHHHHEHKKKKKKHKHKHKHKHKHESKDKEKDRDLHSFNSPASGRSPSLSD
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcaagaaggataagggcttcgagagtccgcgcccgtataaattaactcatcag
gtggtgtgtataaacaacatcaacttccagagaaagtcagtcattggctttgtggagctg
acgctcttccccactgtggtcaacctaaaccgcatcaagctgaacagcaagcagtgccgc
atttacagagtgcgagtgaatgagctggaagcacccttcatttacaatgaccccacactg
gaggtctgccaccatgagtcaaagcagcggaacctgaactatttctctagtgcttatgct
gcagcagtgagtgctgtggatccggatgctggaaatggagagctctcaattaaagtgcca
gctgagctttggaagcaaggagacgagatgaaggtgctaaaggtgtacatagagttctca
ctggaccagccgaagggggggctgcactttgttgttccagacatggagggcagcatggct
gaaagaggagctcacgttttctcctgtggataccagaattccacacggttttggtttccc
tgtgtcgactcgtactcggagctatgcacgtggaagctggagttcaccgtggatgcctct
atggtggccgtgtcatgcggcgacctcatggagactatctacactcatgacatgcgcaag
aagacttttcattatgtgctgcccatcccaactgctgcccccaacatttccctggcagtt
ggaccatttgagatcctcgtggacccctatatgcatgaggtcacgcatttctgcctgcct
cagctgctcccgctacttaaacacaccatgtcctacctgcacgaggtgtttgagttctat
gaggaaattctgacctgccgttacccgtactcctgcttcaagaccgtatttgtggatgag
gcctacatgcaggtctcctcctatgcctccatgagtattttcagtacaaacctgctgcac
agcacgatgattatagaccagacaccaacaacacgccgctgtctggcacagggcctggca
caacagttttttggctgcttcatctcccgcatgtcatggtctgatgaatgggtattgaag
ggcatctcgggctacatctacggcctctacttgaagaaaacgtttggagtcaacgagtat
cgccactggatcagggaggaactggacaagattgtggagtatgagctgaaaacaggaggc
gtcctgctgcacccaacattcgcaggaggaaaagaaaaagacaatcctactccgcacttg
catttctccatcaaacacccacacacgctgtcctgggactattacagaatgttccagtgc
aaggcacacctggtcatgaggctgattgaaaaccgcatcagtatggagttcatgctacag
gtgttcaacaagttgctaagcttggccagcacagcttcatcacagaagtatcagtcacac
atgtggagccagatgcttctgtccacctctgggtttctgaagtccatttccaatgtatca
gggaaggacattgggcccttgatcaagcaatgggtagaccagagtggagtggtcaagttt
tttggaagctttgtctttaacaggaaaagaaatgtgctggaactggagatccgtcaggat
tacatgtcttccggcactcagaaatatgtgggccccataaaagtgactgttcaggagttg
gatggatcctttaatcacatgctgcaaattgaggagaacagccttaaacatgacatcccc
tgtcattccaaaagcaggaggaacaagaagaagaaaatccccctgatgaacggagaagaa
gttgacatggacctgtctgcgatggatgctgactcacccctgctgtggatccggattgac
cccaacatggcagtgctgcgtaaggtggagctggcacaggctgacttcatgtggcagtat
cagctgcgttatgagcgagatgtggtggcacagcaggaagcaatcgttgctctggagaaa
ttccctacagctgcctcccgccttgccctcaccgacatccttgagcatgagcagtgtttc
tataaagtgcgcatgcaggcctgcttctgcctggctaagatcgctaactccatggtgagc
acgtggcaaggcccgccagccatgaagtcgctcttcacacgcatgttctgctgcaagagc
tgccccaacattgtcaagaccaacaacttcattaacttccaaagctacttcctacagaag
accatgccagtggctatggctttgctccgggatgtgcagaatctctgtcccaaagaggtg
ctcaacttcattttggacctcatcaagtacaacgataatggaaagaacaagttttcagat
aattactaccgtgctgagctgatcggagccctgaccaactccctaaccccagccatcagc
atcaacaacgaggtgcgcacggtcgacagcctgaatcccgacgtcaagctcatactggag
gaagtgacacgctttctcaacatggagaaactgctgcccagctacagaaacaccatcact
gttagctgcctgaaggccatcaggatgctgcagaagaacggccacatacccagcgacccg
agcttgtttaaagcctatgcagaatatggacattttgtggatgtgagagttgctgcactt
gaagccgtggtcgactatacaagagttgacagaagcgctgaggagtttcagtggctgctg
gatatggtacagagtgatcctgtgcactatgtcagacacaaaattttaagcatgttgtcc
aagaatccccctttcacaaagacagcagagtctccgttgtgcaacgaggctctcgtggac
cagctatggaaactgatgaactctggtacctcccatgactggcgtttgcgctgtgatgct
gtgaacctgtatcatactttatttggtctgaccaggccctcatgtctacctctgccagaa
cttggcctcgtccttaatctgaaggagaagaaggccgtcctgaatcccaccatcaaatca
gatcaggagggtccagagctcgcacctgagattgtcttcactggcagtgttaaggaagag
catgttgtcatggaaccggtgttgggcagcatagccctcactccgcagggcctcaagaga
aaagcggagactcctttggcttcgccccctgaacctggacaggtgctgcaggacgaaccc
ccagtaaaaatgtctaccaagagtcgattttccatgcaagaggatgaggatattgacatg
gacactgttcatgatagtcgagcatttatctaccatcacctgaacatgctggataggccg
tcaacaccaggtcgagagcctcctgttgtggagcagactgttatgcccatgccagtcaca
cctgtcccaacctttggtaaggagggagcttcctcctcctcctcatccaagcaccaccac
catcaccaccaccatcatcatgagcacaagaaaaagaagaagaagcacaaacacaagcac
aagcacaaacacaagcatgagagcaaggacaaagaaaaggaccgtgatctccacagcttt
aacagcccagcgagtgggcgctcaccctcgctgtctgattga
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integrated database retrieval system
