Clarias gariepinus (North African catfish): 128520165
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Entry
128520165 CDS
T10780
Name
(RefSeq) F-actin-uncapping protein LRRC16A-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128520165
Membrane trafficking [BR:
cgar04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
128520165
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
PBP-Tp47_c
B3GALT2_N
Motif
Other DBs
NCBI-GeneID:
128520165
NCBI-ProteinID:
XP_053350229
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All DBs
Position
4:1288766..1338150
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AA seq
1387 aa
AA seq
DB search
MSEEASSVPRDLLESVRDAVGRKIKLGLRKKVKLEVKGDKVENRVLALASHRGYLLTARI
PAKVEQSFNYLEIQGITCTKPTQCVLEYERGQISLRLVSTEEVNEVVCHIGVCVQRICPA
MPPVKVMKKLSMEPPERIAALQNIWETQSSGEPGPCGGFSQQYRCVCDWLGLPYKEEVQW
DVDTIYLTQDTRELNLQDFSHLENRDLVAIIAVLEFNQWFTKLTTKDYKLSTDVCDQILR
VVARSSRLEELVLDNAGLKTDFAQKLANALSQNASSGLHSLNLANNPLEDRGVAFLGAQF
AKLHKGLKHLNLSRTSLSPKGVNSLAQSLSANQSMPSTLSYLDLSGNLLRGDDLSHFYNF
LGQPNSLSTLDLSNTDCSLDSLCCALLKGSLQHLSVLNASKSVFSHRKGKDIPPAFKQFF
SSALSLSTINVSGTKLPPEALKALLLGLACNPNLKEVALDLSCCELRSGGSQILEGCIAE
IPNISSLDLSDNGLDSDMSTLLVWLAKNRSIRNLSLGKNFNNIKSKNLARVLDSLVHMIQ
EEESPLTSLSLADSKLKTELSIVLNALGSNSSLTRVDISGNGMGDLGAKMLAKALQINSK
LRTVIWDRNNVSPQGLQDVAAALEKNFTIRFMPIPIIDASQALKASPEKTEDALMRMENY
LFRNHETRKYVQEQAYRLQQGIVTTTTQQMIDRICVKVQDHLNSLKNSEQDAILEDVRMA
ENLIKDARNSKTLLPNLYHLGASSRKELNGSTVGPIQEKLDSMAGEVAQVMDEQLQSLLE
SMVDTAESLCPHVMRKPNLRHELIKAGTGKMTVPRSFVKNTLLEQSGIDIINKISEVKLS
LASFLSDRIVDEILEALSGSQNTLAEHLVRKGRPLVQQESVDLDVPEVRTSKRNTMELME
AERLEDLESCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEDVPIHVEDTSPSAKLD
KKPPGAVGDLPSEEAKKLQHYTKLRPKRNKKTQPSRVPVSDPVCMQVSSMPSQEGEQNGL
MGRVDEGVDEFFSRKVSKMNKKSSLKSSDSQDAERKREMRKGGFLNLIKSRSSKDKEKEK
EKEKEKEKEKEKEKEKDKEKEKDKEKTSTSAPPMSPVPQTAEEALSPKAKSQSLRSEHSS
NSDQSEELKTPDCGVQVMGSGLFAEMKAKQEKRSKVPDSSSSPEKPDGPASGQGKVEVSG
TVKPPDKTPRVGGELKPEAAPRTRGPGPNPTSPKPPLQSSKPSLGPRPALPQKPRSSSTR
SMDESSESPAGGQKVPSTLRKTPWEKNGSSYPAQSASTSKISTQEVDSTEGDVSVCKLEP
ELEKTAMRPPEEAEAELEHRTSLSRAARTSSTNQPSSDKNGSKDKDSSQSSRSADSGEEA
DKDFIFV
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaggcgagcagtgtaccgagagatctcctggagagcgttcgggatgcagtg
gggaggaaaatcaaactgggccttaggaagaaagtcaagctggaggtcaagggtgataaa
gtggagaaccgagtcctggctctggcatcacatcgtggatatctcctcactgcacgcatt
cctgccaaggttgaacagtcgtttaactatttggagattcaaggcatcacatgtaccaaa
cccacacagtgtgtgttggagtatgagagaggtcagatctcactcagactggtgtctacg
gaggaggtgaacgaggtggtgtgtcacatcggagtgtgtgtgcagaggatctgtcccgct
atgcctcctgttaaggtgatgaagaagttgtccatggagcctcctgagagaatcgcggct
ctgcagaacatctgggagactcagagctccggagagcccgggccctgcggtggattctct
cagcagtaccggtgtgtgtgcgactggctcggcttaccttacaaagaagaagtccagtgg
gacgtggacacgatctacctgacgcaggacacacgcgagctgaacctgcaggacttcagt
cacttggagaacagggatttggtagcaataatcgccgtcctggagtttaaccagtggttc
accaaactcaccactaaggattataaactgtccacagatgtgtgtgatcagattttgaga
gtcgtcgcacgttccagtcgtctagaggagcttgtcctggacaacgcaggcctcaaaacg
gattttgcccagaagctggcgaacgctctctctcagaacgcctcctcaggactgcactcg
ctaaacctcgccaacaatccactggaggacagaggggtcgcttttttaggtgctcagttc
gccaaactccacaaaggcctcaaacacctcaacctctccagaacctcgttatcacccaaa
ggggtgaacagcctcgcccagtcgctgagtgctaaccagtccatgcccagcacgctcagc
tacctggacctctcagggaacctgctgcgtggagacgacctctcgcatttctataacttc
ctgggccagccgaacagcctgagcacgctggacctgtccaacaccgactgctccctcgac
tcgctgtgctgtgcgctcctgaaaggctcgctccagcatctctccgtccttaacgcgtcg
aagagcgtcttctcccacaggaaaggtaaagacattcctcctgcctttaagcagttcttc
agcagcgccctctccctcagcaccatcaacgtgtccgggaccaaactgccccccgaggct
ttaaaagcgctcctgcttggcctggcctgtaaccccaaccttaaagaggtggcactggac
ctcagctgctgtgagctccgctccggaggctcacagatcctggaaggctgcatcgcagag
atccccaacatctccagcctcgatctttctgacaacggtctggactcggacatgagcacg
ctgctggtgtggctcgccaagaaccgctccatcagaaacctgtcccttggcaagaacttc
aacaacatcaagtccaaaaatctggctcgcgtcctcgacagcctcgtccacatgatacag
gaagaagaatcgcccctgacgtctctgtctctggccgactcgaagctgaagacagagcta
agtatcgtcctgaacgctctgggcagtaacagctctctgacccgagtggacatcagtggg
aacgggatgggggacctcggggctaagatgctggctaaagccctgcagattaacagcaag
ctcaggaccgtcatctgggacagaaacaacgtcagtccacagggtcttcaggacgttgct
gcggcactagaaaagaacttcaccatccgcttcatgcccatccccatcatcgacgcgtct
caggccctgaaggcgagtccggagaaaaccgaggatgccctgatgaggatggagaactac
ctgttcaggaaccacgaaacccgtaaatatgttcaggagcaggcgtatcgtcttcagcag
ggcatcgtcaccaccaccacgcagcaaatgatcgaccggatttgcgtgaaggtccaggac
catctcaactctctgaagaactctgagcaggacgccatattggaggacgtcaggatggcg
gagaacctgataaaggacgccaggaactcaaaaacgctcctccccaacctgtaccacctc
ggcgcctcgtcccggaaggagctgaacggttcgactgtgggtccaattcaggagaaactg
gactccatggctggagaagtggctcaggtcatggacgagcagctccagagcctgttggag
tctatggtggacacggctgagagcctctgtcctcacgtgatgcggaaacccaacctgcgt
cacgagctgatcaaagcagggacggggaagatgacagtaccacgaagcttcgtcaagaac
actctgctcgagcagtctggaattgatattatcaacaagatcagtgaagtgaagttgagt
ctggcttcgttcctctccgaccggatcgtcgatgagattttggaagcgctttctggctct
cagaatacactggcagagcacctggtgaggaaagggcgccccctggtccagcaggagtcc
gtggacttggacgtcccagaggtcagaacctccaaaaggaacaccatggagctgatggag
gctgagaggctggaagacctggagtcctgcatgatgactccaaagtcaaaaaggaagagc
atccacagccggatgctgaggccagtctccagagcatttgagatggagtttgatcttgac
aaggctctagaggatgtgcccatccatgttgaagacacatcaccatctgccaaactagac
aaaaagccacccggcgctgtgggagacctgccatccgaggaagccaagaaactccaacat
tacaccaagttacgacccaagagaaacaagaagactcagccgagcagggttcctgtgagt
gacccagtctgcatgcaggtcagcagcatgccgtcacaggaaggagagcagaacggcctc
atgggaagggtggatgaaggagtggacgagttcttctccaggaaagtctccaagatgaac
aagaagtcctccttgaagtcttcagactctcaagatgctgaaagaaaacgtgaaatgcga
aaagggggctttctaaacctcatcaagtcccgctcaagtaaggacaaggagaaggagaag
gagaaagagaaggagaaggagaaagagaaggagaaggagaaagagaaggacaaggagaaa
gagaaggacaaggagaagacctccacttcagctccacccatgtccccagtccctcagact
gcagaagaagccttgtcccccaaggccaagtcccagtcattacgttcagagcacagcagc
aactcggaccagtctgaggaactgaagacaccagactgtggagtccaggtgatggggtct
ggtctgttcgctgagatgaaggccaagcaggagaagaggtccaaggttcctgactcctcg
tcgagtccggagaagccagacggacctgcatcaggtcaggggaaggtggaggtcagcggc
actgtgaagccccctgacaagacgcctcgggtcgggggggagttgaaacccgaggcagca
ccgaggacccgagggccgggcccgaacccgacgagtccgaaacctccgcttcagagcagc
aaaccgagcctaggccctcgtccggccctcccgcagaaaccccgcagcagcagcacacgc
agcatggacgagagctcagagtctcctgcaggaggtcagaaggttccgtctacactccgg
aaaacgccctgggaaaagaacggatcctcgtaccctgcacagagcgcatccacctccaag
atctccactcaggaagtggactcgactgaaggagacgttagcgtatgtaagctcgagcca
gagctggagaaaacagcgatgcgacccccggaggaggcggaggccgagctagagcacagg
acgtccctgtcccgagccgcaagaacctcgagcacaaaccagccgagctcggacaagaac
gggtcaaaggacaaggactcgagtcagagcagcagatcggcagattctggagaggaagca
gataaagattttatttttgtatag
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