Clarias gariepinus (North African catfish): 128520248
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Entry
128520248 CDS
T10780
Symbol
grik5
Name
(RefSeq) glutamate receptor ionotropic, kainate 5
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128520248 (grik5)
04082 Neuroactive ligand signaling
128520248 (grik5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128520248 (grik5)
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Glutamate (ionotropic)
128520248 (grik5)
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Ortholog
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
GyrI-like
Motif
Other DBs
NCBI-GeneID:
128520248
NCBI-ProteinID:
XP_053350375
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All DBs
Position
4
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AA seq
1052 aa
AA seq
DB search
MPELPAVLLSIHVHFLLVTVLNMPPCSLSQTPLLSSVRMAAILDDRSACGRGERLALALA
RENINSVLEGPARARVDVEVFELQKDSQYETTDTMCQILPKGVVAVIGPTSSPASGSTVS
HICGEKEIPHVKIGPEETPRLPYLRFASVTLYPSNEDLSLAVGAILRSFSYPSASLVCAK
AECLLRLEELVRRFLISRETLSVRMLDDDLDPTSLLKEIRDDKIATIIIDANASVSYLIL
KKASELGMTSAFYKYILTTMDFPLLWLDDVVDEHSNIVGFSMFNTTHPFYLEFIRSLNLS
WREGCDLNPYPGPALSSALLFDAVHVVASAVQELNRSQEIGVKPLSCSSPQIWQHGTSLM
NYLRMVEYDGLTGRVEFNSKGQRTNYTLHILEKHKSGHKQIGIWYSNNTLVMNSTSLDIN
VSETLANKTLIVTTILENPYVMRKANYQELEGNEQYEGFCVDMLKELSDILKFTFRIKLV
DDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTITSEREKVIDFSKPFMTLGISILYRV
HIGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRERRDLLE
NQYTLGNSLWFPVGGFMQQGSEIMPKALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQR
MEVPIESPDDLADQTNIQYGTIHGGSTMTFFMNSRYQTYQRMWNYMYSKQPSVFVKSTEE
GIARVLNSKYAFLLESTMNEYHRSLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEISLAVL
QLQENNRLEILKRRWWEGGQCPKEEDHRAKGLGMENIGGIFVVLICGLIISVFVAVMEFV
WSTRRSAETDEVSVCQEMLTEFRNAVSCKKSSRLRRRRPLSSSLALRHPARLSLGASRPL
RLVREMRLSNGKLYSGAGPLTGGAGGAGGPSELGPGPQRLLEEPLGAKSTPAGPLGPPAV
TVPLPRGCTHVRICQECRRIQSLRTTSCSRIPPSSAPLPRLAPPPPRSSSNTDSEGGGGP
SPRRRGHSPPPRACALPPPQSTANTDLLGGQD
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccagcagtgctgctgtcgattcacgtccacttcctgctagttactgtt
cttaacatgccgccttgttctctcagccagacccctctcctgtcatctgtgcgaatggcg
gcgattttggatgaccgctctgcctgtggccgtggagagcggttggctctagctttagca
cgggagaacatcaacagcgtgctggagggaccggctcgtgctcgcgtcgacgtagaagtc
ttcgagctccagaaagactctcagtacgaaaccacagacaccatgtgccagattctgcct
aagggtgtggttgctgtgattggccccacctccagtcctgcctcgggttctactgtcagt
cacatctgtggggaaaaggagatccctcatgtgaagatcggtcctgaggagactccacgg
ctgccttacctgcgtttcgcgtccgtcacattgtatcctagcaacgaggatctgagcttg
gccgtgggcgccatcctacgctctttcagctacccatcagccagtctggtctgtgccaag
gccgagtgtctgctgagattggaggagctggtgcgacgttttcttatctctagggaaacg
ctgtctgtcagaatgctggatgatgacctcgatcctacgtctttactcaaagagatccgt
gatgataaaatagctacgatcatcatcgatgctaatgcttctgtgtcatacctgatcctg
aaaaaggcgtctgagttggggatgacgtcagcattttacaagtacattcttaccactatg
gactttcctttgctgtggttggatgatgtggttgatgaacactccaacatcgttggcttc
tctatgttcaacaccactcatccattttacctggaatttatccggagcctcaacctgtcg
tggagagaaggctgtgaccttaacccatacccaggaccagcgctgtcttcagctttgctg
ttcgatgccgtccatgtggtggcgagcgctgtccaggagctgaacagaagtcaggaaatt
ggagtgaaacctttaagttgctcctccccacagatctggcaacatgggaccagcctcatg
aactacctgcgcatggtggagtatgatggtttaacaggccgtgttgagtttaacagcaaa
ggtcagagaaccaactacaccctgcatatcctggagaaacataaatcaggccacaaacag
attggtatttggtattcgaacaacaccctggttatgaactccaccagtctggacatcaat
gtctccgaaactttggccaacaagaccctcattgtcaccaccatactggaaaacccgtat
gttatgaggaaagcaaattaccaggaactagaagggaatgagcagtatgaaggcttctgt
gtggacatgctgaaggaattgtcagacattctgaagttcacctttcgaatcaaactggta
gatgacggtctgtacggagctccagagcccaacggttcctggactggcatggtcggggaa
cttatcaatagaaaggcagatttagctgtagctgctttcaccatcacctctgagcgggag
aaagtcatcgatttctccaaacctttcatgaccctgggcatcagtattctttaccgagtt
catatagggcgaaagccaggctatttctcattcctagatcctttctctccagccgtttgg
cttttcatgctgttggcttacctggctgtcagctgcgtgctgttcctcgctgcccggcta
agcccctatgagtggtataaccctcacccgtgcttgcgcgaacgccgggacctgctggag
aaccagtacactctggggaacagtctgtggtttccagtgggaggcttcatgcagcagggc
tcagaaatcatgcctaaagctctgtctacacgctgtgttagcggagtctggtgggcattc
actctgattatcatctcctcgtacactgccaatctggctgcattcctgacagtgcagagg
atggaggtccctatcgagtcacccgatgacctggcagaccaaaccaacattcagtatggc
accatacatggtgggagtaccatgaccttcttcatgaactcacgttatcagacatatcag
cggatgtggaactacatgtactccaagcagcccagtgtgttcgtgaaaagcacggaggaa
ggcattgcccgtgtcctgaattccaaatacgcctttctgctggagagcactatgaatgag
taccatcgcagtctcaactgcaatctcacacagatcgggggcctcctggataccaagggc
tacggcattggcatgcctctgggctctccctttagagatgagatcagtctggctgttcta
cagctgcaggagaataacaggctggagattttgaagcgaaggtggtgggaaggagggcag
tgccccaaagaagaggatcacagagctaaaggtctgggaatggagaatattggtgggatc
tttgtggtattgatctgtggattgatcatctcagtgtttgtggcggtgatggagttcgtg
tggtccacacggcgctctgctgaaacagacgaggtgtctgtgtgccaggagatgttgacc
gagtttcggaatgccgtgtcatgtaagaagagctctcgtttgcgtcgccgccggcctcta
tcgagctctttagccctgcgccacccggctcgcctcagcctgggggcctcacgtcctcta
cgcctcgtccgagagatgcgcctcagcaatggcaagctctacagtggtgccgggccttta
acaggaggcgctggaggtgcaggaggtccctcagagcttggtcctggacctcagcgtctt
ttagaggagccactgggggccaagagcacacccgcagggcctctgggcccccctgcagtg
actgtgcctctgccacgaggctgcactcatgtaagaatttgccaggagtgccggcgcata
cagagcttacgtacaacctcgtgctcgcggatccctccatcctcagcaccgctgcctcgc
ctagctccgcccccaccgcgctcctcctccaacacagacagcgaggggggtggtggccct
agcccacgccgaagaggccactcccctcctccgagagcctgtgcactcccgccccctcag
agcactgcaaatacagacctactgggaggccaggactga
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