Clarias gariepinus (North African catfish): 128520289
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Entry
128520289 CDS
T10780
Symbol
csf3r
Name
(RefSeq) granulocyte colony-stimulating factor receptor
KO
K05061
granulocyte colony-stimulating factor receptor
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128520289 (csf3r)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cgar04050
]
128520289 (csf3r)
04090 CD molecules [BR:
cgar04090
]
128520289 (csf3r)
Cytokine receptors [BR:
cgar04050
]
Interleukin receptor families
Prolactin receptor family
128520289 (csf3r)
CD molecules [BR:
cgar04090
]
Proteins
128520289 (csf3r)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Lep_receptor_Ig
fn3_2
IL6Ra-bind
Motif
Other DBs
NCBI-GeneID:
128520289
NCBI-ProteinID:
XP_053350445
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Position
4:24140269..24153811
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AA seq
831 aa
AA seq
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MILSIMLQHWTTVNAVLWAILYSFTENVRGSPCAKVNSSSKMVPFGSAVTASCIISEECS
LTKQQDFHIKWNKNAHFFSSSKGTQKNVYEIFISNFNDTKAVLECFICSDDNCQVVGAVE
IKAVYPPSIPKNLTCLLNLNEPYTLMCMWDPGKKSSDVPTNYTLYTEFSDSPNSLQRCTY
FPSPEENNYRVPRGGFTLFSEMQVYVVASNFLGQAKSAILVLDPMKTAKLDAPLIQAVGT
QTFGCLEYKWGLAHTQKWIRNSINIEIKYKPVNNEFFNKEQIIRKPDKKVRLCGLLHGMS
YKSQMRVRYHNSSSWSEWSNAIVATTPMKAPNGQLVTWLKLQRAESKNQPAQLFWKQSLQ
FRPNSMNVSYIVSLTKEPRKKKDILCVTAQQHCSFQIHAKFKKVYLIAMNEAGKSNPTEV
PVYRERGMHPVPLVTIVPQSEDSLLVEWKILDTSAISASVLEWKALCGENLCHVSFEIVD
RNQTSFVISGLKPYMPYEVSVYPGGIDSPNSTIAYTKEKAPSISPNLKIGQITPSSVALS
WNEIPLKERNGIITGYSIHYSDHKSNLSVIDTEGTKRELVLKYLYPGTNYEILLITRTHG
GKQIGSNVTVTTASFDAFEIVLIVIPACVGLTLFFFGVFTCFVKQKWMKKYVWPVIPDPA
NSNIKKWTTADSVECIPRFKEVKDPALVYLSHVSLLSLPEKELSKEDENIKSSNWPHIDK
IVDASHDVLSRNSKGFDSEQQNESVPYATVVFAGPYQRQPVPPPVYLRSESTQPLLGEEE
PSSPRPYEKITTQPSLPDVDHFSPFHKNLSVGEEKKSLLVDFPMLRSLEIN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgattctttccatcatgcttcagcactggaccacagtaaatgctgtgctttgggctatt
ctgtattcattcacagaaaatgtcagaggatcaccatgtgctaaggtaaacagttcatca
aagatggttccttttggctcagcagtcactgcttcctgcatcatcagtgaagagtgttca
ctcacaaaacaacaggatttccatataaagtggaacaaaaatgcacattttttctccagt
agtaaaggcactcagaagaatgtatatgaaatcttcatatccaactttaatgacacaaaa
gctgtactggaatgttttatctgctcagatgacaattgccaagtggttggtgccgtggag
atcaaagctgtgtatcctccatccatccctaagaacttgacttgcctattaaatcttaat
gaaccttatactctgatgtgcatgtgggaccctggtaaaaaatcttcagacgttccaaca
aattacaccctgtacacagaattcagtgattcaccaaattcattacaaaggtgcacctac
tttccatcacctgaggagaataactacagggttccacgtggtggcttcactttgtttagt
gagatgcaagtttatgtggtagcatcaaatttccttggccaggccaagtctgccatccta
gtgctggatcctatgaaaacagctaagctggatgctccattgattcaagcggttggaaca
caaacatttggatgccttgagtacaaatggggtcttgcgcatactcagaagtggataaga
aattccataaatatagagatcaaatataaacctgtgaataatgagtttttcaacaaagag
cagattattcggaaacccgataaaaaagttaggttgtgtggtctgcttcatggcatgagc
tacaaatcacagatgagggtaagatatcataacagcagctcatggagtgagtggagtaat
gctatagtggctactacacccatgaaagcccccaacggccagctagtcacatggctaaag
ctacagagggcggaaagtaaaaatcagccagcacagctgttctggaagcaatctttgcag
tttcgtccgaacagcatgaatgtgtcttacattgtatcactaacgaaagaacccagaaaa
aagaaggacattttgtgtgtcacagctcagcaacactgctcttttcaaatccatgcaaag
ttcaagaaggtctacctgatagccatgaatgaagcagggaaatccaaccctactgaggtg
ccagtctacagagaaagaggaatgcatcctgtccctttggtgacaatagttccacaatct
gaagactctttattagtcgaatggaaaatcctggatacctcagccattagtgcaagtgtg
ttggagtggaaagcactatgtggggaaaatttatgtcatgtctcttttgaaattgtggac
agaaatcagaccagctttgtaatatcaggcctcaagccttacatgccttatgaagtttct
gtgtacccgggtggtattgactcgcccaacagcactatcgcatacacaaaagaaaaagcc
ccctccatatctccaaacctaaaaattggtcagatcacaccttcctctgttgcactttcc
tggaatgaaattccattgaaggagagaaatggaattataactggctatagcattcactac
agtgatcataaaagcaatctaagtgttatagacactgaggggacaaagagagagttggta
ctaaaatatctctatccaggcaccaactatgaaatccttctcatcactagaacacatggt
ggcaaacagattgggtccaatgtcacagtcactactgcatcttttgatgcctttgagata
gttctgattgtaattccagcttgtgtcggattgacacttttcttctttggagtgtttacc
tgttttgtcaaacaaaaatggatgaagaagtatgtgtggccagtgataccagaccctgcc
aacagcaatattaagaagtggacaacagctgattctgtggaatgcataccccgctttaaa
gaagtcaaggaccctgcgttggtgtatctctcccacgttagtcttttgagtctgcctgaa
aaagaattgtcaaaagaagatgaaaatattaagagcagcaattggccacatattgacaaa
atcgttgatgccagccacgatgttttatcccgtaattctaaaggctttgactccgagcag
cagaatgagtctgtgccatacgctacggttgtctttgctgggccatatcaacgccagcct
gtccctccaccagtctacctgcgctcagagtccacgcaacccctactaggggaagaagaa
ccttctagtcctcgtccatatgagaaaattacaacccagcccagtcttcctgatgtagac
cacttttcaccatttcacaagaatttaagtgtgggagaagaaaaaaaatcacttctggtg
gatttccctatgctcaggtctttggaaattaattaa
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