Clarias gariepinus (North African catfish): 128520341
Help
Entry
128520341 CDS
T10780
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128520341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128520341
03036 Chromosome and associated proteins [BR:
cgar03036
]
128520341
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
128520341
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
128520341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
128520341
NCBI-ProteinID:
XP_053350513
LinkDB
All DBs
Position
4:complement(29666704..29735555)
Genome browser
AA seq
666 aa
AA seq
DB search
MMQGEDRKKRKQSLNPRSVSEEYCLRERPKEDTTKMKNKLSSSVVTSKKRPWSWDQYLEE
EKASAAPVRFFTEYQSFPYGKNGFKVGMRLEGLDPLHPSMICVLSVAEVIGFRLRLHIDG
YSECYDFWVNADSPDIRPAGWCESTGRKLHPPKGYKMNEFNWEKYLESCNAQAAPKNLFK
SQNSTTTTTKFEVGMKLEAVDRKNPCLVCVASVADIIDSRFLVHFDNWDDTYDYWCDASS
PHIHPVGWCQDHGRPLTAPQGHPNPEHFIWEEYLEDNGASAVPSQAFCMRPPHGFQNNMK
VEVVDRRNPMLIRVASIVDTEDYRVKVHFDGWHNKFDFWVDSDLPDLHPVGWCARTGHPL
EPPLTYAGSSDLKSSMTQGVCPTPGCRGVGHIKGAKYTGHHSAFGCPYSDINMKKEVVLP
DRLGGEKQITFVPVHFVQKTKTLCAEQEEEEEVNDKDSHEENREELSGCDTAPRPRGRPP
GHTTIKREYKEEPSSQGQKAYSPLGKRSRLTTRIAQSTKYLHVKDEDEEIELNSVIEEKN
VDSLQQALHQSVFLSAMSAQPGRDLPLCWEQHCKLLPGVAGVQASRVAHWTVEEVADFIH
SLPGCEEQAKQFREEQIDGKAFLLLTQRDIVKIMSVKLGPALKIYNSILMFKHAEDNQSA
SSDTNT
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagggagaggacagaaaaaaaaggaaacagagtttgaatcctagaagtgtgtca
gaggaatactgtctcagagaacgtccgaaagaagacacgacaaagatgaaaaataaactg
tcttcttcagtcgttaccagtaagaagaggccctggtcatgggatcagtacttggaagag
gaaaaggctagtgcagcccccgtgagattttttactgagtaccagtcatttccttacggc
aagaacggctttaaagtggggatgagactagagggactcgaccccttgcatccttctatg
atctgtgtgctctccgtggctgaggtgatcggcttccgtctgcgtctgcacatcgacgga
tactcagagtgctatgacttctgggttaatgccgattcccctgatatccgaccagccgga
tggtgcgagtccacaggtcgcaaactacaccctccaaaaggttataagatgaatgagttt
aactgggagaaatacctggagtcttgcaatgctcaggctgcaccaaagaatctgttcaaa
tcccaaaacagtactaccaccaccacgaaatttgaagtgggcatgaaactggaggcagtg
gacaggaagaacccctgcctggtgtgcgtggcctctgtggccgacatcatagacagccgc
ttcctggttcactttgacaactgggacgatacatacgattactggtgtgatgccagtagc
ccccatatccaccctgtgggctggtgccaggatcacggacgacctctcacagcacctcag
ggacacccgaatccggagcatttcatatgggaggagtatttagaagacaatggtgcttct
gcggttccgagccaagccttttgtatgagacctccgcacggatttcagaacaacatgaag
gtagaggtggtggacaggagaaaccccatgctgatccgcgtggcctctattgttgatact
gaagactacagagtgaaggtacactttgacggctggcacaataaatttgacttctgggtc
gactcggatctgccagaccttcatcctgtaggctggtgtgcgaggacaggtcaccccctg
gaacctccactaacatatgccggttcttctgacctcaagagctccatgacgcagggagtg
tgtccaaccccagggtgcaggggagtgggacacatcaagggtgcaaaatacacaggacac
cacagtgccttcggctgtccctactcagacattaacatgaagaaggaggtagtgctgcct
gatcgcctcggtggcgaaaagcaaatcacctttgtcccagtgcactttgtgcagaaaacc
aagacgctgtgtgctgagcaagaggaggaggaggaggtgaatgataaagacagccatgag
gagaacagggaagagctgtcgggctgcgacacagcgcctcgtcctcgcggtcggccccct
ggccataccacaataaagagggagtacaaggaggaaccttcatctcagggacagaaggca
tactcgccgctggggaagcgtagccgtctgaccaccaggattgcccagtcaacaaaatat
ctgcatgtcaaagacgaggatgaggagattgagttaaatagcgtgattgaagagaaaaac
gtggacagtctccagcaggccctgcatcagtcggtcttcctgtcagccatgtcggctcag
ccaggtcgtgacttgccgttgtgctgggagcagcactgtaaactccttccaggcgtggct
ggggtgcaggctagccgggtcgcccactggacggtggaggaggttgctgacttcattcac
tctctcccaggctgtgaggaacaagctaagcagtttagagaggagcaaatcgacggcaag
gcgttcctcctcctcacccagcgggacattgtgaagatcatgagtgttaagcttggccct
gctctcaaaatctacaattccatcctaatgttcaagcacgctgaagacaaccagtcagca
agcagcgataccaatacatga
DBGET
integrated database retrieval system
