Clarias gariepinus (North African catfish): 128520379
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Entry
128520379 CDS
T10780
Symbol
adamtsl4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23369
ADAMTS-like protein 4
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128520379 (adamtsl4)
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
128520379 (adamtsl4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_CCN
PLAC
ADAMTS_CR_3
TSP1_spondin
Motif
Other DBs
NCBI-GeneID:
128520379
NCBI-ProteinID:
XP_053350570
LinkDB
All DBs
Position
4:2896100..2935242
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AA seq
1026 aa
AA seq
DB search
MRSACRWCVLWSAVLSAVCVSAVEKANKTVTGRHPRQTEVVTLDGVWGPWSDWAACSQSC
GVGVTERRRQCLPPSQPWSGPSYLPSGVSNHSPLRPPHMPYYPNSYPGGDRVFPANQSPG
LPLYRDTPESVGQELQNNAPPLYQPDVAPPNQPAISIYRSPSSSSSHPYGQSGRGSRWPA
NEGTGRGGVGGSRRSVSANRDPASVRRQIRPGQFGYGRVPYSLPLHRQNRQARNARLHGN
TTTDHLQVKGTVATQEAGSQREENGERTDTKTKEKPRQRQRSITRRAPPQASAPFSSPLH
RPHPHPDTPLYAAPPYVPAPAVPPQHFRCSGKDREIRKCPVEACPGSQVDPRAEQCAVFN
TKEFMGRVYDWEPFTEGSVEQQCELTCRPVGYRFYVRHSEQVKDGTPCVNNTPNDVCVGG
RCLSEGCDGMLGSGVVRDRCGVCGGSDGSCVRVSGSFQNNSVPLGYHKILDIPAGATAIN
ITERSASPNYLALRSGTGQSIVNGRWAVDPPGEYKAGGTTFVYKRNRGETLTAPGPTHSQ
LQLYIIFHKENPGVDYEYYMPVKKDALREWDGGRASLRETSAIVTIEDSAPPPISPPYTS
DRWTPERPRPQSSGSNRNVRIPPRTDIPLDNQSPFMWRLGQLSKCSASCGKGFHHREVLC
VNRHTNEEVHERRCDSATKPVSEDEPCNVHPCPPYWEVGEWSECSVSCGWGLQHRQLQCR
QNFSSRSTRVHHQRCSGLPQPNTTQSCHTHSCSHWQVASNWSACSVDCGAGKRTRKVRCV
SDNGGIVNDVECNSWPRPQGSEDCHMGPCVSNWYFTDWTNTCSAPCGPGVQKRDVVCVSS
GADGECVKDKPADMKACNSGPCVAQAHWFAGPWGQCSAPCGNGTQRRDVICVQKLGSDFS
VTPASGCAHLEKPSPIQTCEVEPCEPQWFTTEWSACSKSCGEGVQTRDVRCLTPDKQPSF
VCDSAHKPHPEQLCNPAPCNPSLDESCKDRRSNCLMVVQARLCVYSYYKMACCASCTQSA
QRAKRH
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcgcgtgcaggtggtgtgtgttatggagtgcagtgctgagcgcagtgtgtgtg
agcgctgtcgaaaaggccaacaaaacagtgactggtcgacatccccgacagacagaagtg
gtgacgctggatggcgtatggggtccatggagtgactgggcggcatgttctcagagctgt
ggagtgggcgtgactgagaggcgcagacaatgtttgccaccgtcccaaccctggagtgga
ccgagttacctgccgtcaggtgtatcgaaccactcccccttacgtccacctcacatgcct
tattaccccaactcatatcctggcggtgacagggtttttccagccaatcaaagtcctgga
ctacctctctatcgagacacacctgaatcagtagggcaggagctgcagaataatgcacct
cctctctaccaaccggacgtcgcaccacccaatcagccagccatttcgatttaccgttcg
ccatcttcttcgtcctcacatccgtacggccaatcggggagaggatccagatggccagcc
aatgaggggactggaagaggaggagtaggtggaagtaggaggtcagtctccgccaatagg
gatccagcgtctgtgagaagacaaatacgtcctggtcagttcggttatggcagggtgccg
tactcgctcccacttcaccggcaaaaccggcaggcgcgaaacgctcgtctccacggaaac
accaccaccgatcacctgcaggtcaaaggcactgtggctacgcaggaagcagggagccag
cgtgaagagaacggagaacggacagacacaaagacgaaggagaaaccgagacagagacag
aggtccatcactaggcgtgcgcctcctcaggcctcggccccgttctcttcacctctccac
aggccacacccacatccagacacaccactttatgccgcacctccttatgttccggcccct
gcggttccgcctcagcacttcaggtgctctgggaaggacagagagattcggaagtgccct
gtagaggcgtgtcccgggtcccaggtggacccccgagccgagcagtgcgccgtgttcaac
actaaagagttcatgggccgcgtttacgactgggagccttttactgaaggctcagtggag
cagcagtgtgagttaacctgtcggccagtcggctaccgtttttacgttcgtcattcagag
caagtgaaagacgggacaccgtgtgttaataacactcccaatgacgtgtgtgtgggggga
cgctgcctcagcgagggatgtgatggcatgttaggctcgggtgtggtgcgtgatcggtgc
ggagtgtgtggggggagtgacggatcgtgtgttcgtgtgtcaggaagtttccagaacaac
agcgttcctctgggatatcacaaaattctcgacattccagccggagcgacagccatcaac
atcacggaacgcagtgccagccccaactacctcgcattgcgtagcggcactggtcagtcc
attgtgaatggtcgctgggccgtggaccctccgggtgaatataaagcaggtggaacaaca
tttgtctacaaacgcaaccgcggagaaacactcaccgctccaggacccacacactcacag
ctacagctctatattattttccacaaggagaatccaggtgtagattacgagtactacatg
cctgtgaagaaggatgcgctgagagagtgggacggagggagagcaagtctccgagagacc
agtgctatagtaaccatcgaagactccgcccctccacctatctctcctccttacacatct
gataggtggacgccggagaggccacgcccccaaagctctgggtcaaaccgtaatgttcgg
atccctccgcgaaccgacatcccgctggataatcagagtccgttcatgtggaggctgggt
cagctcagtaagtgctcagcctcctgtggcaaaggtttccatcacagagaggtgttgtgt
gtgaacagacacactaatgaagaagtgcatgagaggagatgcgactcggcgactaagcct
gtctcggaggacgagccgtgtaacgtccatccctgccctccgtactgggaggtgggagag
tggtccgaatgcagcgtgtcgtgtgggtggggtctgcagcaccgtcagctccagtgcagg
cagaacttctcgagccgctccacccgagtccaccatcagcgctgctccggtctgccgcag
cccaacaccacccagtcctgccacacacactcctgctcccactggcaggtcgcctccaac
tggagcgcctgttcggtagactgcggcgcgggtaaaaggacgaggaaagtgcgctgcgtt
agcgacaacggcggcatcgtgaatgatgtcgagtgtaactcctggccccgcccacaagga
agtgaagattgtcacatgggtccgtgcgtctcgaactggtacttcactgactggacgaac
acttgctccgccccttgcggtccaggtgtacagaagcgtgatgtggtgtgtgtgtcgagc
ggagcagatggcgagtgtgtgaaggacaaaccggctgatatgaaggcgtgtaactcgggg
ccctgcgtggcacaagcacactggttcgctggaccatggggacagtgcagcgcaccttgt
gggaacggaacccagcgcagagacgtgatctgtgttcagaagctggggagcgatttcagc
gtgacgccggccagcgggtgtgcgcacctggagaaaccgtcccccatccagacgtgtgaa
gtggaaccgtgtgaaccacagtggtttaccacagagtggagcgcgtgctccaagtcgtgc
ggtgaaggagtacagactcgagatgtccgttgtctgaccccggataaacagccgagcttc
gtctgtgactccgcccacaaaccccaccctgagcagctctgtaaccccgccccctgcaac
ccctctctagacgagagctgtaaggacagacgctccaactgtctcatggtggtccaggct
cggctttgtgtttactcctactacaagatggcgtgctgcgcctcctgcacccagagcgct
cagagagccaaacgacactga
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