Clarias gariepinus (North African catfish): 128520384
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Entry
128520384 CDS
T10780
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Enzymes [BR:
cgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128520384 (ascc3)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
128520384 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128520384
NCBI-ProteinID:
XP_053350577
LinkDB
All DBs
Position
4:complement(22116110..22290832)
Genome browser
AA seq
2205 aa
AA seq
DB search
MAPPRLTGALRSFSTVSKQDDHSFETYDLKAKRLKRQELFAREGLTWAKVVQFFTQHLEK
KEQQRESQELKNLLQAAKQIVGTDFGQDAIESAAVFLFKTFHNKEQIGHEETRAVKQMFG
PFPGSAADTAFAAISQLVAQLGESQVEAFVQTQTSNKPSDHAMAFGRNIAFSFDTYVLDT
PDSLPWEEENNEELSLDFNSFLSKHAGGRSTGLESTEAHSVSQSSSADRSILRREVEKYL
SGGNMGSSSVEELCTSLFEMLASTKSDDELQNELFEFLGPEGFEMILTLLQKRSDIVDSL
LSAPPDSRVSYPADGMLKNVESTKPAYGCQVTIQSEQEKQMMKLYRREEKRERKKEKRGD
EGEPSEAVFYFDPKELRLQREQALLTARRSPVLGRHREYERIHYPHVYDAYAEATKTSAF
IGGSKMLLPENIQRENNKMFEQVEIPPNEPMPIGFQEKPVYITELDEIGQLVFKGMKRLN
RIQSIVFETAYNTNENMLVCAPTGAGKTNIAMLTVLHEIRQHLQPGGVIRKDQFKIVYVA
PMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVG
DVALSQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNYLDV
ASFLHVNPYIGLFFFDSRFRPVPLGQTFVGIKSTNKIQQLHDMEEVCYDKVLKQIKAGHQ
VMVFVHARNSTVRTAMTLIEMAKNRGELSFFQAEQGADFGHCEKQVQRSRNKQMREMFPD
GFGIHHAGMLRQDRTLMENMFSRGYLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGA
MVDLGILDVMQIFGRAGRPQFDKYGEGTIITSHEKLSHYLTLLTQQNPIESQFHASLADN
LSAEVALGTVTNVEEAVKWLSYTYLYVRMRANPLVYGINHKAYQMDPGLELYRKDLVIEA
GRKLDKARMIRFDERTGYFASTDLGRTASHFYIKYNTIETFNELFNAQKTEADILSIVSK
AEEFEQVKVRDEEMEELEQLLCNFCELPAAGGVENGYGKINILLQTYIGRGEVDSFSLIS
DLSYVAQNAARIMRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGWAHPLRQFATLPPTV
LSKLEEKNLTVDKLKDMRKDEIGHMLHHVNIGLKVKQCVNQIPAILMEATIQPITRTVLR
VRLNVTPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVLSGEPQQVVFTI
PIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGNRE
YESLYKFTHYNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAIFRVFNKYPGAKVVY
IAPLKALVRERIEDWKVRIEEKLGRKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRS
WQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKSVRVVGLSTALANAR
DLADWLGIAQVGLFNFRPSVRPVPLEVHINGFPGQHYCPRMASMNKPAFQAIRSHSPAKP
VLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDEREMTDIIATVRDSNLKLTLAFGIG
LHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYFDGKTHRYVD
YPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLADHLNA
EVAAGTIASKQDAMDYITWTYFFRRLVMNPSYYNLDDITHETINKYLSNLVERSLRDLEC
SYCMEIQEDDRTIEPLTYGRIASYYYLKHQTVRMFKERLKPELPIQELLSILSDAEEYAE
LPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKTNLLLQAHFSRAQLPCSDYGTDTKTVL
DNAIRICQAMLDVVANEGWLVSALSICNLVQMIVQARWLHDSSLLTLPHVDQRNLYLFRK
SSSKGGKGGTRGYQGPIEGLPELIAACDGREEIFIAIVKEEFEPQQITQTWAFLCHLPVL
EVSLSVKGWWEGCEEQTEHALSTSVTNIREKSSWLTVHADQEYVLQVSLQRLNAGRQRRK
QDSKAQAPRFPKPKDEGWFLVLGEIDKRELLAVKRVGYVRNRNVTSIAFYTPEQTGKCIY
TLYLLSDSYLGLDQQYDIHLNVIPASIAAQVNTEVTDGMKDLNLK
NT seq
6618 nt
NT seq
+upstream
nt +downstream
nt
atggctccccctcgacttaccggtgcattgcgctctttctccacggttagcaagcaggac
gaccactcatttgagacgtatgatttaaaggccaagcgtttgaagaggcaggagctgttt
gccagagaaggtctgacctgggcaaaggttgtccagttttttacacaacacttagaaaag
aaggaacaacaaagagagtctcaggagttgaaaaatcttctgcaagcagccaagcagatc
gtgggtacagattttgggcaggatgccattgaaagcgctgccgtcttcttgttcaaaaca
tttcacaacaaagagcagatcggccatgaagagactcgggctgttaagcagatgtttgga
cctttccctggctcggcggctgacactgcctttgctgccatcagccaactggtggctcag
cttggagagtcccaggtggaggctttcgtccagacccagacgtcaaacaagccttcagac
catgcaatggcgtttggaaggaatattgccttctcttttgacacatacgtcctagacact
ccagatagtcttccatgggaggaggaaaataatgaggaactgagtctggacttcaacagc
ttcctgagcaaacatgctggtgggcgtagcactggtttagagagcactgaagcacactcg
gtgagccagagcagcagtgccgatcgctcaatccttagaagagaggtggagaagtacctg
agtggaggtaacatgggctcatccagtgtagaggagctttgtacctcgctgtttgagatg
ctggcttctaccaagagtgatgatgaacttcagaatgagctgtttgagtttcttggtcct
gagggatttgagatgatcttaacgcttctccagaaaaggtctgatattgtagactccctt
ctgtctgcgccaccagacagcagagtcagctacccggcagatgggatgcttaaaaatgta
gagtctactaaacctgcatatggctgtcaggtgaccattcagtccgagcaggagaagcag
atgatgaaactgtaccgtcgggaggaaaaaagggagaggaagaaagagaaacgaggagat
gagggcgaaccgtcagaagcggttttttattttgaccctaaggagctgagactgcagaga
gagcaggccttgctgactgcacggcgttctccggtgttaggacgtcacagagagtacgag
cgcattcactaccctcatgtctatgatgcatacgctgaagccaccaagacctccgccttt
attggaggctccaagatgctgctgcctgagaacatccagagagagaataataagatgttt
gagcaggtcgagatcccacccaacgagcccatgcctatcggcttccaggagaagcctgtc
tacatcacagaactagatgagattggacagcttgtgttcaaaggtatgaagcggctaaac
aggatccaatccattgtttttgagacggcttacaacaccaatgaaaacatgctggtgtgt
gctcccactggtgcagggaagaccaacatcgccatgctcactgttctgcacgagatccga
cagcacttacagccaggaggtgtcatccgcaaagaccagtttaagatagtatacgttgct
ccaatgaaggctttggctgctgagatgactaattacttcagtaagcgcttggagccactg
ggcatcgccgtcaaagagctgacaggcgacatgcagctgaccaaaggggaaattctccgc
actcagatgttggtgacgactcccgagaagtgggatgttgtgacgaggaaaagcgtggga
gacgtggctctgtcccaaatcgttcgtttgcttattctggatgaggtgcacctgctgcac
gaggaccgagggcccgtgttggagagtctggtggccaggacactgcggcaggtggagtca
actcagagcatgattcgcatcctgggcctgtctgccactctgcctaattacttggacgtg
gcatcattcctgcatgtgaacccgtacatcggcctgttcttcttcgacagccgatttcgg
cccgttcctcttggacagaccttcgtgggaattaagtcaacaaataagattcaacagctc
catgacatggaagaggtctgctatgacaaagtactaaagcagattaaagctggacatcag
gtgatggttttcgtccatgcccggaactccactgtgcgcacggccatgactttgattgag
atggccaagaaccgaggagagttatcgttcttccaggcagagcagggagcagattttggt
cattgtgagaagcaggtgcaacgctcacgaaataagcagatgagggaaatgtttccagat
gggtttggaatccaccatgctgggatgctgaggcaggaccggacacttatggagaacatg
ttctccagaggctacttaaaggtcttggtgtgtacagccactctggcctggggcgtcaac
ctgcccgctcatgcagtcatcattaagggcactcagatctatgatgcgaagagaggtgct
atggtggatctgggtatcctggatgttatgcagatttttgggcgtgctggtcgtcctcag
tttgataaatatggagagggcaccatcatcacctcacatgaaaagctgagccactacctc
accctcctcacacaacaaaaccccatcgagagtcagtttcatgccagcctcgcagataac
ctcagtgctgaggtggctttgggaactgtgaccaacgtcgaagaagccgttaagtggttg
agctacacctacctctatgtacgaatgagagccaatccgcttgtttacggcatcaaccac
aaggcctaccagatggatccagggttggagctgtacagaaaagatttagtgattgaagcc
gggaggaagctggataaagctcggatgatccgttttgatgagagaaccggttattttgct
tctacagatcttggcagaacagccagccacttctacataaagtacaacacaattgagaca
ttcaatgagctgttcaacgctcagaaaacagaagctgacattctgagcatcgtctccaaa
gcggaggagtttgagcaggttaaggtacgagacgaggaaatggaggaactggagcagttg
ttgtgtaacttttgtgaacttccggcagctggaggagtagagaacggctacggcaagatc
aacatactgttgcaaacctacatcgggcgcggcgaggtcgacagcttctccctcatctct
gatctgtcttatgtggcccagaatgctgcacgtatcatgagggctctgttcgagatcgca
ctgaggaagcgctggccagcaatgacgtacaggctgctcaatctgtgtaaggtaattgat
aagcgcctgtggggatgggcacaccccctgcgtcagttcgccacgctgcctcccaccgtg
ctgtccaagctagaggagaagaatctcacagtggacaagcttaaagatatgcgcaaagac
gagataggtcacatgttacaccacgtgaacattggcttaaaggtgaagcagtgcgtcaat
cagattcctgcgatactgatggaagctaccattcagccgatcacgcgaaccgtcctgcgc
gtgcgcctgaacgtcacccccgacttcaggtggaatgaccaggtgcatggctcggttgga
gagccatggtggctgtgggtggaggaccccatcaatgaccacatttatcactcagagtat
ttcctccttcagaaaaaacaggtgctgagtggagagcctcagcaggtggtcttcaccatc
ccgatctttgagcccatgccgtcacagtactacatccgtgctgtgtctgatcgctggttg
ggctccgaggctgtgtgcatcatcaacttccagcaccttattttacctgaaagacatccc
ccccacacagagctcctggacctccagccactgcccgtgaccgcactgggtaaccgggag
tatgagagcctctataagttcacccattacaatcccattcagacacaaatctttcacacg
ctctaccacactgacaccaacgtgctgctcggagcaccgaccggctcaggaaaaaccatc
gcagcagagatggctatcttcagagttttcaacaaataccctggcgctaaggtagtgtac
atcgctcctcttaaagcactggtcagggagaggattgaagattggaaagtcaggatagag
gagaaacttgggcgaaaggtggtagagctgacaggggatgtgaccccagacatgcgggcc
atagcacaggctgatctgattgtcacgactccagagaagtgggatggagtcagccgcagc
tggcaaaatcgcagttatgtacagaaagtcgccatccttattatcgatgaaatccacttg
ctcggggaggacagagggcctgttctggaagtcattgtatcgaggacaaattttatctca
tcccacacctccaagtctgtgcgagtggtcgggctctccacagccctcgccaacgcacgc
gacctcgcagactggctgggcatcgcacaggtgggattgtttaatttccggccttcagta
cgtccagtcccgttggaggtgcacataaatggtttccctgggcagcactactgtcctcgc
atggccagcatgaataaacccgcctttcaagcaatacgcagccattccccggccaagcct
gtcctcatatttgtgtcatctcgacggcagacgcgtctcactgcgctcgacctgatcgcc
tttctggctacagaggatgacccaaaacagtggttacaccaggatgagagagagatgacc
gatatcattgccacagtcagggattcgaacctcaagctcactctggcatttggcattggt
ttgcaccatgctggtctgcacgagagagacagaaagactgtggaggagctgttcgtcaac
tgcaagattcaggtgttaatcgccactagtactctggcgtggggtgtgaatttcccagcc
catttggtgattgtgaaaggcactgaatactttgatgggaaaacacaccgttatgtggat
tacccaattacagatgtcctgcagatgatggggagggcaggtagacctcagtttgatgac
cagggcaaagccgtcatccttgtccatgacattaagaaagatttctacaagaagttcctc
tatgagcccttccctgtcgagtccagcttgcttggcgttctggctgatcacttgaatgca
gaggtagctgcaggaactattgcttccaagcaggatgccatggactacataacgtggacg
tactttttccgtcgcctcgtcatgaaccccagctactacaatttggatgacatcactcac
gagactataaacaaatacctgtctaatttggtggaaagaagcctcagagatctggaatgt
tcttactgtatggaaatacaggaggatgaccgcaccatcgagcctctcacatacggacgc
atcgcttcatattattacctgaaacaccagaccgttcgcatgttcaaggagagactgaag
ccggagcttcccatccaggagctgctgtccattctttcggatgcagaggaatatgctgaa
ctgccagtgcgccataacgaggatcagctgaacagcgagctagcgcagcgactgcccctg
caggtcaacccacactcgtatgacagcgcccacaccaagaccaacttgctgttgcaggct
cacttcagccgagcccagctgccctgcagcgattacggcacagacacaaagaccgtcctg
gacaatgccatccgcatctgtcaggccatgttggacgtggtagcaaatgaaggctggctg
gtttctgctctcagcatctgtaatctggtccagatgatcgtccaggctaggtggcttcac
gactcctctctgctcaccctgccacatgtagaccagcggaacctctacctcttcaggaaa
tcgagctccaaaggtgggaagggtggaacccgaggttatcagggcccaatcgaagggctt
cctgagctcatagctgcctgtgatggaagagaggagatctttatagccatagtgaaggaa
gagttcgagcctcaacagatcacacagacctgggcttttctatgtcacttgcctgtgctg
gaggtgagtttgagtgtgaagggatggtgggaaggctgtgaggaacagacagagcatgct
ctgtccaccagtgtgaccaacatcagggagaagagcagctggctgaccgtgcacgctgac
caggaatatgtgctccaagtgtccttgcagcgtctcaacgcaggccggcagagaaggaag
caggacagcaaggcacaggccccgcgtttcccaaagcccaaagacgaggggtggttcctg
gtgctgggtgagatagataagagagagcttctggccgtcaaacgagtgggatatgttcgc
aaccggaacgtgacatcgatagccttctacacacctgaacagaccgggaagtgtatctac
accctctatttgctgagcgacagttacctgggcttagatcagcagtacgacatccaccta
aacgtgattcctgccagcatcgccgcccaggtcaacaccgaggtcacagatggcatgaaa
gacctgaacttgaaatga
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integrated database retrieval system
