Clarias gariepinus (North African catfish): 128520406
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Entry
128520406 CDS
T10780
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain
KO
K07375
tubulin beta
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04145
Phagosome
cgar04540
Gap junction
cgar04814
Motor proteins
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128520406 (tubb5)
09144 Cellular community - eukaryotes
04540 Gap junction
128520406 (tubb5)
09142 Cell motility
04814 Motor proteins
128520406 (tubb5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128520406 (tubb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128520406 (tubb5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128520406 (tubb5)
04147 Exosome [BR:
cgar04147
]
128520406 (tubb5)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
128520406 (tubb5)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
128520406 (tubb5)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128520406 (tubb5)
Exosomal proteins of colorectal cancer cells
128520406 (tubb5)
Exosomal proteins of bladder cancer cells
128520406 (tubb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
128520406
NCBI-ProteinID:
XP_053350610
LinkDB
All DBs
Position
4:11271600..11277176
Genome browser
AA seq
444 aa
AA seq
DB search
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEVA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagggagattgtgcacatccaggccggccagtgcggtaaccagatcggtgccaagttc
tgggaggtgatcagcgatgaacacggcatcgacccaacaggaacctaccacggggacagc
gacttgcagctcgacagaatcagtgtctactataacgaggctacaggaggtaaatatgtg
ccccgtgctattcttgttgacctggagcctggcaccatggactcagtgcgctctggaccc
ttcggacagatcttcagacctgacaactttgtgtttggtcagagtggtgcaggtaataac
tgggctaaaggccactacaccgagggagcagagctggtggactcagtcctggatgtggtg
cgtaaggagtctgagagctgcgattgcctccaaggcttccagctcacccactccctgggt
ggcggcaccggatccggtatgggcacgctcctcatcagcaagatccgggaggagtatccc
gaccgcatcatgaacaccttcagtgtggtgccttctcctaaagtgtctgacacggtggtg
gagccctacaacgcgacgttgtccgtgcatcagctggtggagaacacagacgagacctac
tgcattgacaacgaagctctgtacgacatctgcttccgcactctgaaacttaccactcct
acttacggcgacctaaaccacctcgtctccgctaccatgagtggcgtcaccacctgcctc
cgcttccccgggcagctcaatgctgacctgcgcaagctggccgtcaacatggtgcccttc
ccgcgtcttcacttcttcatgcctggtttcgcacctcttaccagccggggaagccagcag
taccgcgctctcaccgtgcccgagctgacacagcaggtattcgatgccaagaacatgatg
gctgcctgtgatccccgtcatggccgttaccttaccgtagccgccgtcttccgcggccgc
atgtccatgaaggaggtggacgaacagatgctgaacgtgcagaacaagaacagcagctac
ttcgtggaatggatccccaacaacgtcaagacggccgtgtgtgacatcccaccacgaggc
ctcaagatggccgtcaccttcatcggtaacagcacagccatccaggagctgttcaagcgc
atctctgagcagttcaccgccatgttccggcgcaaggctttcctgcattggtacaccgga
gagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaagatgctacagctgaagaggagggcgagttcgaagaggagggc
gaggaggtcgcctaa
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integrated database retrieval system
