Clarias gariepinus (North African catfish): 128520435
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Entry
128520435 CDS
T10780
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Pattern recognition receptors [BR:
cgar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128520435 (nlrc3)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128520435
NCBI-ProteinID:
XP_053350650
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Position
4:4685288..4702421
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AA seq
1142 aa
AA seq
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MNTYSINIGMERSSQIPWQDDCYMVLKSTPKPGNHKKMEDASWLRKNQKSLQRFITEPLL
TDIVNHMRKVDELSAEGAGIIKEAGSLEDKVHAAIELLFRGDPQGTALQAYLKSSHPDEY
NLITFHDVVAQQHKDSLLRQVREDNEIVSSNQTSDPALLLVDGVSDLQQREHDLIQVSVN
RGVGPLHSRPLGLDKLFAPLTRVSTAPRVTLTIGVAGSGKTRLVHKFIHQWSSGKIFPEL
SLAIPIACWELSSFDRLSLERLLRLVVPYDNIDVILNSRICKVLLIVDGLEEFRSPLDFS
ETPVTSDPRRELPVSDLITNIIRGNLLPGASMWLLSRPGVGAKVPAGLVDRVTEVPPFLH
AQIQDYIKYENLPENSYTQHEQSNLSDSQTQTAEDKSCQAWEHLQFQKPLLILCSVPCIC
RIVASTLSHLVGRDMDDIHLPRTLTEVYTLYCWPHLSSIDPSGGNIRKPLGNLGRLAFYS
LLRQRHTFLEPELRTYGVDIPPAPGSLGHRLLRREQSWSSESVSWRFVHTSVQEFLGALF
YYVSSRRGMFDLFSESSVSWPRIGFQNHYRAALQKTSTSSNGKLDLFMRFLSGLLSSAVG
ALLGGALGVSREEQVTQRTMAMTLLQSTVVASGGEAVSMRSVATVACLAELQQMEWIRSV
EEDLTCSRLHGKLKGGVCTVLAYLLQVSESCAKETQLSNCLDSGSFKQLLPQLLYCSNLR
MENNKFKDDAMELLGSLLSAKDCHIQSLSMADSSISSKGIKPLSRALLVNRTLTALDLHG
NNIGTKGAKTLAEALKMNQVIVTVNLQSNQIEDEGARALAEVLQSNRKLITLNVQKNNVG
PEGVKRIADALKKNQTLQELNVSGNHLGDLGALALAQALAVNHTLQTLSLRSNSVSDRGM
KALTQALRYNKALTKLNLRENSIGVEGARAIARALQENHTLRELDLTANLLHDEGVKAIA
AAVKVNRALTSLHLQWNFMKAGAAKALALSLQDNKYIQLLDLQENALGDDGVVALAGSLK
ANSSLMVLYLQGVSAGEAGAVALAEALTVNQSLHTLDLRGNFIGMGGAKALSSALKTNRS
LRSLNLQENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSDAIRADASECVV
DI
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtacagcataaacattggaatggagaggagctcacaaattccttggcaggac
gactgctacatggttcttaaatccacaccaaaaccaggaaatcacaagaagatggaggat
gctagttggttacgcaagaatcagaaatctttgcaacgtttcatcactgaaccattactc
acggacatagtcaaccacatgaggaaggtggatgagctgagtgcagaaggggcaggaatt
atcaaggaggcaggatcattggaggataaagtgcatgcagcgattgagctgctctttagg
ggtgatccgcagggcaccgccctccaggcatacctgaagagctcgcacccggacgagtat
aacctcataacttttcatgacgtcgttgctcagcaacataaagacagcctcctccggcaa
gtcagagaggacaatgagattgtatcatccaatcaaacatctgaccctgccctgttactg
gtcgatggtgtgtctgacctgcaacagagagagcacgatctcattcaagtgtcagtcaac
cgaggagtggggcctttgcacagtcgtccgctgggactggataaactctttgctccactg
acaagggttagcaccgcccctcgtgtcacactgacaataggtgtggctggaagcggaaaa
acccgactggtccacaaattcatccatcagtggagctcaggaaagatattcccagagttg
agcttagcaattcctattgcatgttgggaattgagcagctttgatagattgtcacttgag
aggttgcttcgattggttgttccatatgataacattgacgtgattttgaacagtcgtatc
tgtaaagtgctgttgatcgttgatggattggaagaatttcgctcccctcttgacttctca
gagaccccggtaacttcagatccacgtcgggagcttccagtgtccgatctcattacaaac
attatcaggggcaacttgttacctggggcttcaatgtggcttttgtcaaggcctggagtt
ggggcaaaagtacccgcagggttggtggatcgtgtgacagaggtcccaccttttttgcat
gctcagattcaggattacatcaagtatgaaaacttgccagagaactcatacacacaacac
gagcagtccaatctgtcagactctcaaacacaaacagcagaggacaaatcttgccaggca
tgggagcacctacagttccagaaacccttgctcattctttgttcagtgccttgcatttgt
cgtattgttgcatccaccttgtcccaccttgtggggagagacatggatgatatacatcta
ccacgaactctgacggaggtatacaccctctactgttggccacatctctcttccatagat
ccatccggtggaaacatccggaagccgcttggcaatcttggacgactggccttttacagt
ctgctgcgccaacgtcatacatttcttgagcctgaattacgaacttacggtgttgacatt
ccaccagcaccaggatctctgggacatcggctccttcgacgtgagcagagctggtcttca
gaatcagtctcatggcggtttgtacacacgtctgtgcaggagtttcttggtgcactcttc
tattatgtgtcctcacgcagaggaatgtttgatctgttctctgagagcagtgtttcatgg
cctcggattggattccaaaaccattatcgtgctgcactccagaaaactagcacctcatcc
aatggcaaactcgacctctttatgcgcttcctctctggcctgttgtcctcagcagtcggg
gctctgctgggcggggctttgggagtaagccgagaagagcaggtgacgcagcgcaccatg
gcaatgaccctgcttcagagtacggtggtagcatcaggaggtgaggcggttagcatgcgt
agtgtggctacagtcgcttgcctggcagagttacagcagatggagtggatacgctctgta
gaggaggatctgacctgctccagactacatggaaagctgaaaggtggggtttgcacagtg
ctggcgtatctgctgcaggtgtcagagtcatgtgccaaggagacacaactctcaaactgc
ctggattctggctccttcaagcaacttctcccacagcttttatactgcagcaacttgaga
atggaaaataacaaatttaaggatgatgcaatggagctcctgggaagtttactaagtgcc
aaagactgtcatattcaatcactaagtatggcagatagctcgattagcagtaaagggatc
aagccactgagtagagcgcttctggtcaatcggactctcaccgcactggatctccatggc
aacaacattggcaccaaaggagccaaaacattggcagaggcactaaagatgaaccaggtt
atcgtgacagtcaatctccagagtaatcagatagaggacgagggagctcgcgcactggcc
gaggttttgcagtcaaacaggaaactcatcacactaaatgttcaaaagaacaacgtaggc
ccagagggggtgaagagaattgcagacgcgctcaaaaagaatcagacattacaagagctc
aatgtttctggcaatcatttgggagatttgggcgcactggcattggcgcaagcactcgct
gtcaaccatacactccaaactctaagcctccgaagtaactctgttagcgacaggggcatg
aaggctctgactcaggccttgcgctacaacaaagcccttactaaactcaaccttagggag
aactccatcggagttgaaggtgctcgagccatcgctcgagctttacaagagaaccacaca
ctcagggaacttgatctcacggccaatcttcttcatgatgaaggtgtgaaagccatcgca
gcagcagtgaaagtcaacagagctctgacatctttgcatctccagtggaactttatgaag
gctggagcagctaaagctctagccctgtctctgcaagataacaagtacatccagctcctg
gatctccaggaaaatgctctgggtgatgatggtgttgtcgcactggcaggctcgctaaag
gctaactcttccctcatggtgctctatctccagggtgtatcggcgggcgaggcaggtgcc
gtggcactggctgaagctctgacggtcaaccaaagcctccacacactcgatcttcgtggt
aacttcatcggcatgggcggagctaaggctctctccagtgcgctgaagaccaatcggagt
ttgagaagtttgaatctgcaggagaactctttgggaatggatggagccattttcatcgct
acggcactcagaggaaatcatcaactgacctatataaatcttcagggtaacggaattggc
gagtcgggagcgaaggttgtttcggatgctatacgagctgacgcgtcggagtgtgtggtg
gacatttga
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