Clarias gariepinus (North African catfish): 128520447
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Entry
128520447 CDS
T10780
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
KO
K08336
ubiquitin-like protein ATG12
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04068
FoxO signaling pathway
cgar04136
Autophagy - other
cgar04140
Autophagy - animal
cgar04621
NOD-like receptor signaling pathway
cgar04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
128520447 (atg12)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128520447 (atg12)
04136 Autophagy - other
128520447 (atg12)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128520447 (atg12)
04622 RIG-I-like receptor signaling pathway
128520447 (atg12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128520447 (atg12)
04121 Ubiquitin system [BR:
cgar04121
]
128520447 (atg12)
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128520447 (atg12)
Membrane trafficking [BR:
cgar04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
128520447 (atg12)
Ubiquitin system [BR:
cgar04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
128520447 (atg12)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128520447 (atg12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG12
ATG8
GemA
Motif
Other DBs
NCBI-GeneID:
128520447
NCBI-ProteinID:
XP_053350666
LinkDB
All DBs
Position
4:14433649..14437187
Genome browser
AA seq
125 aa
AA seq
DB search
MSDNGESPTEPQKEELSTQNQQNVAGDSGDPAKTEEKKKIDVLLKAVGDTPIMKTKKWAV
ERERTVQALAQFISRFLKLEANEQLFIYVNQSFAPSPDQEVGVLFDCFGSDGKLVLHYCK
SQAWG
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaacggtgagtctcctacagaaccacaaaaagaagaattatcgacacagaac
caacagaatgtcgccggagattccggagaccccgcgaagactgaggagaagaaaaagatt
gacgtgctgttaaaagcagttggagacactcctatcatgaagactaagaagtgggcagta
gagcgagagaggactgttcaggctctcgctcagttcatctcacgctttcttaaattagag
gccaacgaacaactgtttatttatgtcaatcagtcgtttgctccgtccccagaccaagaa
gtgggtgtcctttttgattgttttggcagtgatgggaaacttgttcttcattattgcaag
tcacaagcctggggttga
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integrated database retrieval system
