Clarias gariepinus (North African catfish): 128520516
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Entry
128520516 CDS
T10780
Symbol
cacng6b
Name
(RefSeq) voltage-dependent calcium channel gamma-6 subunit
KO
K04871
voltage-dependent calcium channel gamma-6
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04260
Cardiac muscle contraction
cgar04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128520516 (cacng6b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
128520516 (cacng6b)
04261 Adrenergic signaling in cardiomyocytes
128520516 (cacng6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128520516 (cacng6b)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128520516 (cacng6b)
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Gene cluster
GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
SK_channel
SUR7
TMEM43
DUF5367
Motif
Other DBs
NCBI-GeneID:
128520516
NCBI-ProteinID:
XP_053350757
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All DBs
Position
4:13930854..13940586
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AA seq
267 aa
AA seq
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MWSNFFMQQEEDARVGGHVGAGAGASAGGGGGRSKNRPRSSRMSESQEGKIKLAFFVAIV
GVTLTVLGMGTEFWVELAQPKHFQNNESCQLVHYGLWKACTRTLWVSDIDPERESCGPAE
LPGESNCTYFKFYTSGENAVIFNKTTDKSLSLASAMLALFGLFLMMMGSVCIIMSLTKNV
PFLLKPASVCFLISGILILVSILVFHRSVLALLASDHSVPLHYELSWSVACVGSAGAILL
LGGVLFLLLSLPYNPFKKCIKHRNSSA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtggtctaactttttcatgcagcaggaagaagatgcccgagtgggtgggcatgtggga
gctggggctggggccagtgctgggggagggggtggacgcagcaaaaacagacctaggtcc
tcacgcatgagtgagagccaagagggcaaaatcaagttggcattttttgttgccattgtg
ggtgtgactctgactgtgctgggcatgggcacagagttctgggtggaactggcacagccc
aaacatttccaaaacaacgagtcctgtcagttggtgcactacggcctgtggaaagcctgc
actcgtacactctgggtgtctgacattgacccggagagagagagctgtggccctgcagag
ctgcctggagaatctaactgcacatacttcaaattctacacttcaggagaaaatgcagtg
atttttaataaaacaacagataaaagtttgagtctggcatcagcgatgctggcactgttc
ggtttgtttctaatgatgatgggctctgtgtgtattatcatgtctcttacaaagaatgta
cccttcctcctcaaacctgcttctgtctgcttcctcatctcaggcatcctgatcttggtg
tctatcctggttttccaccgatcggtactggcactgctggcgagtgatcacagtgtccct
ctgcactatgagctgtcctggtcagtggcgtgtgtaggctcggccggggccatccttctt
cttggcggtgttcttttcctgttgctttccttaccctacaatcctttcaagaaatgcata
aagcaccgaaatagcagtgcttag
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