Clarias gariepinus (North African catfish): 128520537
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Entry
128520537 CDS
T10780
Symbol
gdf6a
Name
(RefSeq) growth/differentiation factor 6-A
KO
K20012
growth differentiation factor 6
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04060
Cytokine-cytokine receptor interaction
cgar04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128520537 (gdf6a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128520537 (gdf6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128520537 (gdf6a)
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Transforming growth factors (RSTK binding)
128520537 (gdf6a)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
128520537
NCBI-ProteinID:
XP_053350790
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Position
4:26682704..26687842
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AA seq
413 aa
AA seq
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MDASRTLALCLLVVFLWSLPCARSAALVPSSGPKRNRGTRSPHDGQRSPKFLRDVFASSP
GLSARDDFKNSVVPHDYMLSIYRTYSAAEKLGLNASFFRSSKSANTITSFVDRGKDEFSH
SPLRRQKYVFDVSTLSDKEELVGAELRILRKPPEDALSSPSDLYNIELVSCGSARSLDSS
TSVGLRNARNPAWEVLDVWDMFKSRLSTDHGGQLCMELRATVGQSDAEVDLRSLGFERRG
RAQREKAILVVYARSRKRENLFNEMRENIKSSRGSRGSEQDTGLLFKARRRRRTALNNRH
GKRHGKKSKSRCSRKALHVNFKELGWDDWIIAPLDYEAYHCEGMCDFPLRSHLEPTNHAI
IQTLMNSMDPNSTPPSCCVPTKLSPISILYIDSGNNVVYKQYEDMVVEQCGCR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctcacgcacactagcgctatgcttgctcgtggttttcctttggagtttaccg
tgcgcccgatcggccgcgctcgtgccttcctcggggccgaaaaggaacagggggaccagg
agcccacatgatggacaaaggtcacccaaatttcttagagatgtttttgcatcctccccc
ggtctaagtgcacgggatgattttaagaactcggttgtgccacacgattacatgctctcc
atatacaggacttattctgccgctgaaaagctgggactaaacgcgagctttttccgctca
tccaagtctgcgaataccataacaagttttgtagacaggggaaaagacgagttctcgcat
tcccctttgcgaagacaaaaatatgtgtttgatgtctccactctctcggacaaagaggag
ctggtgggagcggaattgaggatcctccgtaaacccccagaggacgcgctgtcctctccg
tcggatctctacaacattgagctggtgtcctgcggctccgccaggtctctggactccagc
acctccgtgggtctgcgcaatgcccgaaacccagcctgggaggttttggacgtgtgggat
atgtttaaaagcagactctccacggatcacgggggtcagctgtgtatggagcttagggcc
actgtgggtcagtctgatgctgaagtggacttgaggtctcttgggtttgagaggcgcggt
cgcgcgcagcgagagaaggctatcctggtggtgtatgcccgctcccgaaagagggagaac
cttttcaacgagatgcgggaaaatatcaagtcctctcgaggctctcgcggctctgagcag
gacacggggctgctcttcaaagcgcgccggagacggagaactgcactgaataaccggcac
ggcaagagacacggcaaaaagtcgaagtcgaggtgtagccgcaaggcgcttcacgttaac
ttcaaggagctcggttgggacgactggataatcgcgcccttggactatgaagcgtaccat
tgcgagggcatgtgcgatttcccgctcaggtcgcacctggagcccacgaaccacgccatc
atccaaactctcatgaactcaatggatccgaacagcacgccgcccagctgctgcgtgccc
accaaactcagccccatcagtatactgtacatagactccggcaataatgtcgtttacaaa
cagtacgaggacatggttgtggagcaatgtggctgcaggtag
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